RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PTBP1P26599 531 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 CHRNB4P30926 498 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 S100A5P33763 92 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 RFC3P40938 356 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SELENOPP49908 381 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 CAPZA1P52907 286 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 LSM3P62310 102 aaKnown RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SLC3A1Q07837 685 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 DCTN2Q13561 401 aaKnown RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 ACSM3Q53FZ2 586 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 C22orf42Q6IC83 251 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 KLHL24Q6TFL4 600 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 CATSPERDQ86XM0 798 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 DOLPP1Q86YN1 238 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 RFLNBQ8N5W9 214 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 OR6Q1Q8NGQ2 317 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 FNDC9Q8TBE3 224 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 ABHD3Q8WU67 409 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 RND1Q92730 232 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 NINJ1Q92982 152 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 APH1AQ96BI3 265 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 C10orf35Q96D05 121 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SLAMF6Q96DU3 332 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 DNAJA3Q96EY1 480 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 MAP6Q96JE9 813 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 CMTM3Q96MX0 182 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 HDHD5Q9BXW7 423 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SLITRK2Q9H156 845 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 TP63Q9H3D4 680 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 ZCCHC4Q9H5U6 513 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SNTG1Q9NSN8 517 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SLCO1C1Q9NYB5 712 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SPRR3Q9UBC9 169 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 NUFIP1Q9UHK0 495 aaKnown RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 LRP12Q9Y561 859 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SIRT4Q9Y6E7 314 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 NCOA6Q14686 2063 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 TRBV5-7A0A0A0MS05 114 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 IGHV3-15A0A0B4J1V0 119 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 A0A0U1RQV5 110 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 MEGF11A6BM72 1044 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 FIGNL2A6NMB9 653 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 PRR32B1ATL7 298 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 LOC110117498-PIK3R3F6TDL0 507 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 J3QW42 95 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CASKO14936 926 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 TPPPO94811 219 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 COX5BP10606 129 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 FSTP19883 344 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 KLK2P20151 261 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CD40LGP29965 261 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 RPS19P39019 145 aaKnown RBP8.03□□□□□ -1.12
PTPRE-207ENST00000471218 OR3A2P47893 321 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 HCCSP53701 268 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 RPS11P62280 158 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF45Q02386 682 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF846Q147U1 533 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 RAB35Q15286 201 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 GUSBP1Q15486 140 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 HSD17B12Q53GQ0 312 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 DDI2Q5TDH0 399 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CARD17Q5XLA6 110 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 NSUN5P2Q63ZY6 315 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 MZT2AQ6P582 158 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 LRRN1Q6UXK5 716 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 Q6ZSR3 168 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CEACAM19Q7Z692 300 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 WDFY1Q8IWB7 410 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF676Q8N7Q3 588 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 IL17RDQ8NFM7 739 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 OR52H1Q8NGJ2 320 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 LILRB4Q8NHJ6 448 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ROBO4Q8WZ75 1007 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 BORCS5Q969J3 196 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 TMEM203Q969S6 136 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 SPTSSAQ969W0 71 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 TRMT61AQ96FX7 289 aaKnown RBP8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF845Q96IR2 970 aaPredicted RBP8.03□□□□□ -1.12
PTPRE-207ENST00000471218 DERL3Q96Q80 235 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 DMRTA2Q96SC8 542 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 FOXB1Q99853 325 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ATF6BQ99941 703 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 SH3GL3Q99963 347 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF416Q9BWM5 594 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 RGCCQ9H4X1 137 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 SEC61A2Q9H9S3 476 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 PLGRKTQ9HBL7 147 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CRLF2Q9HC73 371 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 GPR35Q9HC97 309 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 FRRS1LQ9P0K9 344 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ASH2LQ9UBL3 628 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CKLFQ9UBR5 152 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 ADAM30Q9UKF2 790 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 FBXL3Q9UKT7 428 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 HHLA2Q9UM44 414 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 CAMK2AQ9UQM7 478 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms