RNA–Protein interactions for RNA: ENST00000470143.1

NOP56-210, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-210ENST00000470143 ATG16L2Q8NAA4 619 aa11.23□□□□□ -0.61
NOP56-210ENST00000470143 RAB40AQ8WXH6 277 aa11.23□□□□□ -0.61
NOP56-210ENST00000470143 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
NOP56-210ENST00000470143 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
NOP56-210ENST00000470143 SSBP3Q9BWW4 388 aaPredicted RBP11.23□□□□□ -0.61
NOP56-210ENST00000470143 GORASP2Q9H8Y8 452 aa11.23□□□□□ -0.61
NOP56-210ENST00000470143 PTTG3PQ9NZH4 202 aa11.23□□□□□ -0.61
NOP56-210ENST00000470143 B9D1Q9UPM9 204 aa11.23□□□□□ -0.61
NOP56-210ENST00000470143 TRBV4-1A0A0J9YWV2 114 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 KIR2DS1A0A191URI9 304 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 DNAJC9-AS1A6NH13 148 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 DCTN6O00399 190 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 MLNRO43193 412 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 IDH3BO43837 385 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 PPP1R3DO95685 299 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 PLATP00750 562 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 MTNR1AP48039 350 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 SMIM11AP58511 58 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 BPIFB3P59826 476 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 SF3A3Q12874 501 aaKnown RBP eCLIP11.22□□□□□ -0.615e-7■■■■■ 32.7
NOP56-210ENST00000470143 RFX4Q33E94 735 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 ZNF404Q494X3 552 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 SLC36A3Q495N2 470 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 FGD3Q5JSP0 725 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 GLYATQ6IB77 296 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
NOP56-210ENST00000470143 KLBQ86Z14 1044 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 OR6V1Q8N148 313 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 SLC26A10Q8NG04 563 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 OR52E2Q8NGJ4 325 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 Q8TCH9 128 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 CMTM5Q96DZ9 223 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 NEIL1Q96FI4 390 aaPredicted RBP11.22□□□□□ -0.61
NOP56-210ENST00000470143 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
NOP56-210ENST00000470143 HCAR1Q9BXC0 346 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 RERGLQ9H628 205 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 TMEM100Q9NV29 134 aa11.22□□□□□ -0.61
NOP56-210ENST00000470143 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 TMPRSS2O15393 492 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 SEMG1P04279 462 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 ACSM4P0C7M7 580 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
NOP56-210ENST00000470143 NCK1P16333 377 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 PRDX6P30041 224 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 SLC6A6P31641 620 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 NUDT2P50583 147 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 PSME3P61289 254 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 GNB2P62879 340 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 BAMBIQ13145 260 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 HNRNPA0Q13151 305 aaKnown RBP11.21□□□□□ -0.61
NOP56-210ENST00000470143 SLC18B1Q6NT16 456 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 OR5AS1Q8N127 324 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.61
NOP56-210ENST00000470143 OR10AD1Q8NGE0 317 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 ZNF420Q8TAQ5 688 aaPredicted RBP11.21□□□□□ -0.61
NOP56-210ENST00000470143 SLC25A28Q96A46 364 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 TSSK2Q96PF2 358 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 ERMAPQ96PL5 475 aaPredicted RBP11.21□□□□□ -0.61
NOP56-210ENST00000470143 TMEM246Q9BRR3 403 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 MS4A7Q9GZW8 240 aaPredicted RBP11.21□□□□□ -0.61
NOP56-210ENST00000470143 MYLK2Q9H1R3 596 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 SPAG4Q9NPE6 437 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 CYB5R1Q9UHQ9 305 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 POLR1DQ9Y2S0 133 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 PCDHGB1Q9Y5G3 927 aa11.21□□□□□ -0.61
NOP56-210ENST00000470143 H0YL77 283 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 WIPF1O43516 503 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 PTBP3O95758 552 aaKnown RBP11.2□□□□□ -0.62
NOP56-210ENST00000470143 RENP00797 406 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 FPR3P25089 353 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 RBMXP38159 391 aaKnown RBP11.2□□□□□ -0.62
NOP56-210ENST00000470143 MDH1P40925 334 aaKnown RBP11.2□□□□□ -0.62
NOP56-210ENST00000470143 PMELP40967 661 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 CD200P41217 278 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 IL13RA1P78552 427 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 GK2Q14410 553 aaPredicted RBP11.2□□□□□ -0.62
NOP56-210ENST00000470143 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 OTPQ5XKR4 325 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 LEG1Q6P5S2 330 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 DCDC5Q6ZRR9 648 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 NLRC3Q7RTR2 1065 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 PLPP7Q8NBV4 271 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 PYURFQ96I23 114 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 ATF6BQ99941 703 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 SLC22A4Q9H015 551 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 SLITRK2Q9H156 845 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 OR52D1Q9H346 318 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 SRA1Q9HD15 236 aaKnown RBP11.2□□□□□ -0.62
NOP56-210ENST00000470143 ZNF446Q9NWS9 450 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 KCNG2Q9UJ96 466 aa11.2□□□□□ -0.62
NOP56-210ENST00000470143 NOP16Q9Y3C1 178 aaKnown RBP11.2□□□□□ -0.62
NOP56-210ENST00000470143 F5H5P2 479 aa11.19□□□□□ -0.62
NOP56-210ENST00000470143 PHYHO14832 338 aa11.19□□□□□ -0.62
NOP56-210ENST00000470143 GMNNO75496 209 aa11.19□□□□□ -0.62
NOP56-210ENST00000470143 GADD45GO95257 159 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms