RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TSPAN19P0C672 248 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 HOXA4Q00056 320 aaPredicted RBP15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 PRAMEF6Q5VXH4 476 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 OTPQ5XKR4 325 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 LIPHQ8WWY8 451 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 ERGIC1Q969X5 290 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 APOBEC3DQ96AK3 386 aaPredicted RBP15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 TAMM41Q96BW9 452 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 ITPKCQ96DU7 683 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 HCAR1Q9BXC0 346 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 RERGLQ9H628 205 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 RIMS3Q9UJD0 308 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 FOXJ3Q9UPW0 622 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 HIF3AQ9Y2N7 669 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 SIGLEC9Q9Y336 463 aa15.64■□□□□ 0.09
NCKIPSD-209ENST00000470006 IQCF6A8MYZ5 107 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 POLR3GO15318 223 aaPredicted RBP15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 XPNPEP2O43895 674 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 PAHP00439 452 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 GATA4P43694 442 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 WDR4P57081 412 aaKnown RBP15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 MAB21L1Q13394 359 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 AQP6Q13520 282 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 PIN1Q13526 163 aaPredicted RBP15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 AGKQ53H12 422 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 INTS11Q5TA45 600 aaKnown RBP15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 BTN2A1Q7KYR7 527 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 VMO1Q7Z5L0 202 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 MICU2Q8IYU8 434 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 RASSF5Q8WWW0 418 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 ECSITQ9BQ95 431 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 SMURF1Q9HCE7 757 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 ONECUT1Q9UBC0 465 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 RNF7Q9UBF6 113 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 FBLN5Q9UBX5 448 aa15.63■□□□□ 0.09
NCKIPSD-209ENST00000470006 A0A1W2PRD5 423 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 A0A1W2PRF3 423 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 A0A1W2PRM7 423 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 J3QW42 95 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 LGALS8O00214 317 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR10H3O60404 316 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR5F1O95221 314 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 IGF2P01344 180 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 IFI30P13284 250 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 TNFRSF1BP20333 461 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 EEF1B2P24534 225 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 PRSS12P56730 875 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 MTPNP58546 118 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 MPPED2Q15777 294 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 NSUN5P1Q3KNT7 163 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 CLEC12AQ5QGZ9 265 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 C1orf122Q6ZSJ8 110 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 LYG1Q8N1E2 194 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR51A7Q8NH64 312 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 Q8TCH9 128 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 AENQ8WTP8 325 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 ST8SIA4Q92187 359 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 ZNF583Q96ND8 569 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 CNTD2Q9H8S5 307 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 FN3KRPQ9HA64 309 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 ZNRD1Q9P1U0 126 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 DNAJB11Q9UBS4 358 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 POLR1DQ9Y2S0 133 aa15.62■□□□□ 0.09
NCKIPSD-209ENST00000470006 TENM3Q9P273 2699 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR6C6A6NF89 314 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 XKRYO14609 159 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 GYPAP02724 150 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 CCDC92Q53HC0 331 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 BEND6Q5SZJ8 279 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 EPGNQ6UW88 154 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 DLEU7Q6UYE1 221 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 CELF2-AS1Q8N7Q2 184 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 SPERTQ8NA61 448 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR4S1Q8NGB4 309 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 BPIFA2Q96DR5 249 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 GRHPRQ9UBQ7 328 aa15.61■□□□□ 0.09
NCKIPSD-209ENST00000470006 TRAV27A0A087WT01 109 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 TRAV38-1A0A0B4J264 116 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 A0A1B0GVI7 797 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 RER1O15258 196 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 NDUFA2O43678 99 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 MPIG6BO95866 241 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 ECDO95905 644 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 RPL4P36578 427 aaKnown RBP15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 MRPL19P49406 292 aaKnown RBP15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 RAD23AP54725 363 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 PRB3Q04118 309 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 SELPLGQ14242 412 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 CDONQ4KMG0 1287 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 DHDDSQ86SQ9 333 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR5R1Q8NH85 324 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 NPRL2Q8WTW4 380 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 SPRYD4Q8WW59 207 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 TRIM36Q9NQ86 728 aa15.6■□□□□ 0.09
NCKIPSD-209ENST00000470006 TMEM120BA0PK00 339 aa15.59■□□□□ 0.09
NCKIPSD-209ENST00000470006 RNASEK-C17orf49H0YIS7 233 aa15.59■□□□□ 0.09
NCKIPSD-209ENST00000470006 DVL1O14640 695 aa15.59■□□□□ 0.09
NCKIPSD-209ENST00000470006 CD200P41217 278 aa15.59■□□□□ 0.09
NCKIPSD-209ENST00000470006 POU4F2Q12837 409 aa15.59■□□□□ 0.09
NCKIPSD-209ENST00000470006 OR8G1Q15617 311 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms