RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SMIM19Q96E16 107 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 SULT4A1Q9BR01 284 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 C1orf123Q9NWV4 160 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 ATP23Q9Y6H3 246 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 RAC1P63000 192 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 ZNF117Q03924 483 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 AMER3Q8N944 861 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 PLPP7Q8NBV4 271 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 OR10G3Q8NGC4 313 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 OR51E1Q8TCB6 317 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 GRPP07492 148 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 LGALS4P56470 323 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 AQP6Q13520 282 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 EBPQ15125 230 aaKnown RBP13.62□□□□□ -0.23
LIMS2-213ENST00000469300 SIGIRRQ6IA17 410 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 CELF2-AS1Q8N7Q2 184 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 SLC7A6Q92536 515 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 ZC3HAV1LQ96H79 300 aaKnown RBP13.62□□□□□ -0.23
LIMS2-213ENST00000469300 TSSK2Q96PF2 358 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 TECTBQ96PL2 329 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 SIGLEC11Q96RL6 698 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 NDUFB11Q9NX14 153 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 FOCADQ5VW36 1801 aa13.62□□□□□ -0.23
LIMS2-213ENST00000469300 FABP7O15540 132 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 SPINT1O43278 529 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 GUSBP08236 651 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 SNRNP70P08621 437 aaKnown RBP13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ZNF728P0DKX0 622 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 PMPCAQ10713 525 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 CDK5R1Q15078 307 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ELFN2Q5R3F8 820 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 TCFL5Q9UL49 500 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 COPS3Q9UNS2 423 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ANKRD61A6NGH8 418 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 B4E171 279 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 GREM1O60565 184 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 SLC2A10O95528 541 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 PPP3CBP16298 524 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 TSPAN7P41732 249 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 MYBPHQ13203 477 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 TPBGQ13641 420 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-213ENST00000469300 PAQR6Q6TCH4 344 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ALKAL2Q6UX46 152 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 MSRB3Q8IXL7 192 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 WDR54Q9H977 334 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 TRABD2BA6NFA1 517 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 LALBAP00709 142 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 IGFBP1P08833 259 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-213ENST00000469300 AVPR2P30518 371 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 SERPINF1P36955 418 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 PLXDC2Q6UX71 529 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 DNAJC5GQ8N7S2 189 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 C10orf90Q96M02 699 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 DNAJB12Q9NXW2 375 aaKnown RBP13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ZNF391Q9UJN7 358 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 SPAG17Q6Q759 2223 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ASPDHA6ND91 283 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 GLAP06280 429 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 PTGER4P35408 488 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 EDDM3BP56851 147 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 GPR157Q5UAW9 335 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 LCN10Q6JVE6 187 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 SMOC1Q9H4F8 434 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 ACKR4Q9NPB9 350 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 GPR84Q9NQS5 396 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 NECAP2Q9NVZ3 263 aa13.61□□□□□ -0.23
LIMS2-213ENST00000469300 COL11A1P12107 1806 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-213ENST00000469300 A0A1W2PQD3 144 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 C5orf49A4QMS7 147 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 AGPAT2O15120 278 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SNCAP37840 140 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 CT55Q8WUE5 264 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 ST8SIA4Q92187 359 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SLC25A46Q96AG3 418 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 FOXB1Q99853 325 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 GALNT9Q9HCQ5 603 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 ZMAT5Q9UDW3 170 aaKnown RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 GDF2Q9UK05 429 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 DOCK5Q9H7D0 1870 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 NRASP01111 189 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 RFC3P40938 356 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 CCR9P51686 369 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SLC22A25Q6T423 547 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 PLK3Q9H4B4 646 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SIGLEC7Q9Y286 467 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 SEC16AO15027 2179 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 ZNFX1Q9P2E3 1918 aaKnown RBP13.6□□□□□ -0.23
LIMS2-213ENST00000469300 MED6O75586 246 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 S100A8P05109 93 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 MAGEB1P43366 347 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 MEOX1P50221 254 aa13.6□□□□□ -0.23
LIMS2-213ENST00000469300 HMGA2P52926 109 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms