RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TRBV9A0A0B4J1U6 114 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 C11orf94C9JXX5 98 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 ZZEF1O43149 2961 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 CACNG3O60359 315 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 SRP72O76094 671 aaKnown RBP3.24□□□□□ -1.89
LSM5-209ENST00000468872 FGF4P08620 206 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 GNAO1P09471 354 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 ACSM4P0C7M7 580 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 ADRB3P13945 408 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 OMGP23515 440 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 MXD1Q05195 221 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 TWF1Q12792 350 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 MERTKQ12866 999 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 MADCAM1Q13477 382 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 ZSCAN26Q16670 478 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 LUZP2Q86TE4 346 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 BIVMQ86UB2 503 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 FAM3DQ96BQ1 224 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 OR5B12Q96R08 314 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 BPIFA3Q9BQP9 254 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 C11orf70Q9BRQ4 267 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 KCNJ16Q9NPI9 418 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 ST3GAL6Q9Y274 331 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 ARHGAP31Q2M1Z3 1444 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 SCN2AQ99250 2005 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 INSRP06213 1382 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 KIF1AQ12756 1690 aa3.24□□□□□ -1.89
LSM5-209ENST00000468872 BTAF1O14981 1849 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 FRYQ5TBA9 3013 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 RELNP78509 3460 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 H0YHG0 523 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 NDUFAB1O14561 156 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 DNAJB6O75190 326 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 CTAG2O75638 210 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 ANXA8P13928 327 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 GTF2E2P29084 291 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 MAS1LP35410 378 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 GPX4P36969 197 aaPredicted RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 CX3CR1P49238 355 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 CRISP1P54107 249 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 SPTAN1Q13813 2472 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 CAPRIN1Q14444 709 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 C1orf185Q5T7R7 199 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 ANXA8L1Q5VT79 327 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 TENM4Q6N022 2769 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 TEX43Q6ZNM6 134 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 EIF3MQ7L2H7 374 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 CMTM1Q8IZ96 169 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 OR4S2Q8NH73 311 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 MARCH1Q8TCQ1 289 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 TSEN15Q8WW01 171 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 CAPSLQ8WWF8 208 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 ZNF285Q96NJ3 590 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 TMEM165Q9HC07 324 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 SAMSN1Q9NSI8 373 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 HRASLS2Q9NWW9 162 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 ZNF629Q9UEG4 869 aaPredicted RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 LGALS13Q9UHV8 139 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 CD84Q9UIB8 345 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 PSG8Q9UQ74 426 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 USP54Q70EL1 1684 aa3.23□□□□□ -1.89
LSM5-209ENST00000468872 MTCL1Q9Y4B5 1905 aaKnown RBP3.23□□□□□ -1.89
LSM5-209ENST00000468872 FAM186AA6NE01 2351 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 IGLV11-55A0A075B6I3 123 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 A0A096LNJ9 63 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 TMX2-CTNND1H3BSU7 103 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 WRBO00258 174 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 EIF4E2O60573 245 aaKnown RBP3.22□□□□□ -1.89
LSM5-209ENST00000468872 PLEKP08567 350 aaPredicted RBP3.22□□□□□ -1.89
LSM5-209ENST00000468872 BCKDHBP21953 392 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 ILKQ13418 452 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 PRPSAP1Q14558 356 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 POU2AF1Q16633 256 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 CCNJQ5T5M9 372 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 ANKRD22Q5VYY1 191 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 Q6P435 159 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 DUX4L9Q6RFH8 374 aaPredicted RBP3.22□□□□□ -1.89
LSM5-209ENST00000468872 OAFQ86UD1 273 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 C12orf56Q8IXR9 622 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 ZNF786Q8N393 782 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 ZFP41Q8N8Y5 198 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 LKAAEAR1Q8TD35 194 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 ZFP90Q8TF47 636 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 CEP170P1Q96L14 293 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 PRRC1Q96M27 445 aa3.22□□□□□ -1.89
LSM5-209ENST00000468872 LYARQ9NX58 379 aaKnown RBP3.22□□□□□ -1.89
LSM5-209ENST00000468872 CDC42BPGQ6DT37 1551 aa3.21□□□□□ -1.89
LSM5-209ENST00000468872 SMG6Q86US8 1419 aaKnown RBP3.21□□□□□ -1.9
LSM5-209ENST00000468872 HUS1O60921 280 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 ERCC1P07992 297 aaPredicted RBP3.21□□□□□ -1.9
LSM5-209ENST00000468872 OR8G3PP0DMU2 310 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 MYL2P10916 166 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 STOMP27105 288 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 UQCRFS1P47985 274 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 CYB561P49447 251 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 UBE2AP49459 152 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 RAB9AP51151 201 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 RND2P52198 227 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms