RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ZNF774Q6NX45 483 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 ZNF585AQ6P3V2 769 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 OR8B12Q8NGG6 310 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 WNT2BQ93097 391 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 GPR137Q96N19 417 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 WACQ9BTA9 647 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 ZCCHC4Q9H5U6 513 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 ZNF71Q9NQZ8 489 aaPredicted RBP16.63■□□□□ 0.25
SMC4-209ENST00000468653 CKLFQ9UBR5 152 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 PRSS50Q9UI38 385 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 ADAM30Q9UKF2 790 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 V9GY05 133 aa16.63■□□□□ 0.25
SMC4-209ENST00000468653 FRYQ5TBA9 3013 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 A0A1B0GVI7 797 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 SYT7O43581 403 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 MAS1P04201 325 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 THBS2P35442 1172 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 CXADRP78310 365 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 ACSF3Q4G176 576 aaPredicted RBP16.62■□□□□ 0.25
SMC4-209ENST00000468653 COMMD2Q86X83 199 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 GCNT2Q8N0V5 402 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 OR1F12Q8NHA8 337 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 OR51E1Q8TCB6 317 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 SLC7A6Q92536 515 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 PGAM5Q96HS1 289 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 OR2H1Q9GZK4 316 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 RNF121Q9H920 327 aa16.62■□□□□ 0.25
SMC4-209ENST00000468653 ANXA2P2A6NMY6 339 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 M0R135 149 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 SYNGR3O43761 229 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 SLC19A2O60779 497 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 ATF1P18846 271 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 APEX1P27695 318 aaKnown RBP16.61■□□□□ 0.25
SMC4-209ENST00000468653 OR3A2P47893 321 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 FOXG1P55316 489 aaPredicted RBP16.61■□□□□ 0.25
SMC4-209ENST00000468653 PSG4Q00888 419 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 FBXW9Q5XUX1 488 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 LRRTM1Q86UE6 522 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 AKR7LQ8NHP1 331 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 FGFBP3Q8TAT2 258 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 ZNF799Q96GE5 643 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 GFI1Q99684 422 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 A0A096LPE4 126 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 A0A1W2PPZ6 126 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 OTX1P32242 354 aaPredicted RBP16.61■□□□□ 0.25
SMC4-209ENST00000468653 PSMD7P51665 324 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 SF3B4Q15427 424 aaKnown RBP eCLIP16.61■□□□□ 0.255e-8■■■■□ 22.8
SMC4-209ENST00000468653 RSPO1Q2MKA7 263 aaPredicted RBP16.61■□□□□ 0.25
SMC4-209ENST00000468653 SLC36A2Q495M3 483 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 KRTCAP3Q53RY4 240 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 FAM214BQ7L5A3 538 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 ZNF627Q7L945 461 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 TRMT10AQ8TBZ6 339 aaKnown RBP16.61■□□□□ 0.25
SMC4-209ENST00000468653 WNT5BQ9H1J7 359 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 ABRACLQ9P1F3 81 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 MALT1Q9UDY8 824 aa16.61■□□□□ 0.25
SMC4-209ENST00000468653 FREM1Q5H8C1 2179 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 ANKRD11Q6UB99 2663 aaPredicted RBP16.6■□□□□ 0.25
SMC4-209ENST00000468653 FABP12A6NFH5 140 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 IFITM5A6NNB3 132 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 FAM25AB3EWG3 89 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 FAM25CB3EWG5 89 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 FAM25GB3EWG6 89 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 AIPO00170 330 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 PAHP00439 452 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 DBHP09172 617 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 ADRA2CP18825 462 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 HTR5AP47898 357 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 TPTEP56180 551 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 HES5Q5TA89 166 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 OR2A2Q6IF42 318 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 FAM131AQ6UXB0 335 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 FGD2Q7Z6J4 655 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 NAA40Q86UY6 237 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 C9orf106Q8NAJ2 232 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 ZNF671Q8TAW3 534 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 ZNF275Q9NSD4 429 aaPredicted RBP16.6■□□□□ 0.25
SMC4-209ENST00000468653 TAS2R4Q9NYW5 299 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 ZNF319Q9P2F9 582 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 FOXJ3Q9UPW0 622 aa16.6■□□□□ 0.25
SMC4-209ENST00000468653 A0A1B0GTI1 187 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 TBX1O43435 398 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 MMP7P09237 267 aaPredicted RBP16.59■□□□□ 0.25
SMC4-209ENST00000468653 SNRPBP14678 240 aaKnown RBP16.59■□□□□ 0.25
SMC4-209ENST00000468653 CRYGSP22914 178 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 MPGP29372 298 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 GFOD2Q3B7J2 385 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 NSUN5P2Q63ZY6 315 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 PRSS45Q7RTY3 260 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 SAMD12Q8N8I0 201 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 CNEP1R1Q8N9A8 125 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 FGGYQ96C11 551 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 GPR84Q9NQS5 396 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 SLC17A5Q9NRA2 495 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 V9GYH0 126 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 A0A0B4J203 849 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 OR6C6A6NF89 314 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 LMX1BO60663 402 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 FAM87AP0C7U9 286 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms