RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SELEP16581 610 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 KRT72Q14CN4 511 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 KRTAP27-1Q3LI81 207 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 ARMCX4Q5H9R4 360 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 COLCA1Q6ZS62 124 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 OR5L1Q8NGL2 311 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 OR13G1Q8NGZ3 307 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 PYURFQ96I23 114 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 SLC30A2Q9BRI3 323 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 FN3KQ9H479 309 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 TMEM165Q9HC07 324 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 KRCC1Q9NPI7 259 aaPredicted RBP20.53■□□□□ 0.88
PTCH1-210ENST00000468211 MED4Q9NPJ6 270 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 NUP50Q9UKX7 468 aa20.53■□□□□ 0.88
PTCH1-210ENST00000468211 GADD45GO95257 159 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 EGR1P18146 543 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 PRDX6P30041 224 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 PMELP40967 661 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 SPIBQ01892 262 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 PAX2Q02962 417 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 AWAT1Q58HT5 328 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 FAM201AQ5SY85 155 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 SLC18B1Q6NT16 456 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 DNM1P34Q6PK57 102 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 NAA40Q86UY6 237 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 C1orf147Q96MC9 270 aaPredicted RBP20.52■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF48Q96MX3 618 aaPredicted RBP20.52■□□□□ 0.88
PTCH1-210ENST00000468211 ZNF582Q96NG8 517 aaPredicted RBP20.52■□□□□ 0.88
PTCH1-210ENST00000468211 DUX5Q96PT3 197 aa20.52■□□□□ 0.88
PTCH1-210ENST00000468211 RPRD1BQ9NQG5 326 aaKnown RBP20.52■□□□□ 0.88
PTCH1-210ENST00000468211 IQCF6A8MYZ5 107 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 ARPC3O15145 178 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 HLA-DPB1P04440 258 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 SLC6A6P31641 620 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 CD80P33681 288 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 ESCO2Q56NI9 601 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 SLC27A4Q6P1M0 643 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 PGM2L1Q6PCE3 622 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 MOGAT3Q86VF5 341 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 JAZF1Q86VZ6 243 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 NTN4Q9HB63 628 aa20.51■□□□□ 0.87
PTCH1-210ENST00000468211 DDX28Q9NUL7 540 aaKnown RBP20.51■□□□□ 0.87
PTCH1-210ENST00000468211 SOX21Q9Y651 276 aaPredicted RBP20.51■□□□□ 0.87
PTCH1-210ENST00000468211 A0A1B0GWJ7 208 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 OR6C68A6NDL8 312 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 RENP00797 406 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 ACSM4P0C7M7 580 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 FPR3P25089 353 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 GGT2P36268 569 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 PAX8Q06710 450 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 DOK3Q7L591 496 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 ZBTB46Q86UZ6 589 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 MUC20Q8N307 709 aaPredicted RBP20.5■□□□□ 0.87
PTCH1-210ENST00000468211 IFT27Q9BW83 186 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 FAM107BQ9H098 131 aa20.5■□□□□ 0.87
PTCH1-210ENST00000468211 PNRC2Q9NPJ4 139 aaKnown RBP20.5■□□□□ 0.87
PTCH1-210ENST00000468211 PKD1L1Q8TDX9 2849 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 F5H5K5 113 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 OR10H3O60404 316 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 GMNNO75496 209 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 ANOS1P23352 680 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 GSSP48637 474 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 SRP9P49458 86 aaKnown RBP20.49■□□□□ 0.87
PTCH1-210ENST00000468211 SDR9C7Q8NEX9 313 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 PITX2Q99697 317 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 TMEM246Q9BRR3 403 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 MRI1Q9BV20 369 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 MRPL22Q9NWU5 206 aaKnown RBP20.49■□□□□ 0.87
PTCH1-210ENST00000468211 OR5V1Q9UGF6 321 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 CD300AQ9UGN4 299 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 CYB5R1Q9UHQ9 305 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 LRCH1Q9Y2L9 728 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 MGAM2Q2M2H8 2515 aa20.49■□□□□ 0.87
PTCH1-210ENST00000468211 IGHV3OR16-10A0A075B7F0 116 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 DNAJC9-AS1A6NH13 148 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 IFNL4K9M1U5 179 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 HSD17B1P14061 328 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 SMIM11AP58511 58 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 MAB21L1Q13394 359 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 GK2Q14410 553 aaPredicted RBP20.48■□□□□ 0.87
PTCH1-210ENST00000468211 SLC35F1Q5T1Q4 408 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 KLBQ86Z14 1044 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 DACT3Q96B18 629 aaPredicted RBP20.48■□□□□ 0.87
PTCH1-210ENST00000468211 SSBP3Q9BWW4 388 aaPredicted RBP20.48■□□□□ 0.87
PTCH1-210ENST00000468211 TMEM100Q9NV29 134 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 MAGEL2Q9UJ55 1249 aa20.48■□□□□ 0.87
PTCH1-210ENST00000468211 ARPC2O15144 300 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 SPRY1O43609 319 aaPredicted RBP20.47■□□□□ 0.87
PTCH1-210ENST00000468211 SNX3O60493 162 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 IGHV4-38-2P0DP08 117 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 RPS2P15880 293 aaKnown RBP20.47■□□□□ 0.87
PTCH1-210ENST00000468211 RRM2P31350 389 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 HOXA4Q00056 320 aaPredicted RBP20.47■□□□□ 0.87
PTCH1-210ENST00000468211 RBMS3Q6XE24 437 aaKnown RBP20.47■□□□□ 0.87
PTCH1-210ENST00000468211 OR52E2Q8NGJ4 325 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 OR10S1Q8NGN2 331 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 MAP6Q96JE9 813 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 ATF6BQ99941 703 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 HCAR1Q9BXC0 346 aa20.47■□□□□ 0.87
PTCH1-210ENST00000468211 HKR1P10072 659 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms