RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 USF1P22415 310 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 IL32P24001 234 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 SYNJ2BPP57105 145 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 RPS23P62266 143 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 SLAQ13239 276 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 RCAN2Q14206 197 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 FAM83EQ2M2I3 478 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 TTC19Q6DKK2 380 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 NANOGP8Q6NSW7 305 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 WDR82Q6UXN9 313 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 CBLN2Q8IUK8 224 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 COX18Q8N8Q8 333 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 SNX31Q8N9S9 440 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 INO80EQ8NBZ0 244 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR11H7Q8NGC8 314 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 COQ8AQ8NI60 647 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 ITFG1Q8TB96 612 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 LRRC29Q8WV35 223 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 RGP1Q92546 391 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 STARD4Q96DR4 205 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 PDXPQ96GD0 296 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 CSPG4P5Q96PW8 444 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 CAMK2N2Q96S95 79 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 CD209Q9NNX6 404 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF355PQ9NSJ1 428 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 AHSPQ9NZD4 102 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF222Q9UK12 451 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 LRP4O75096 1905 aa2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 TET2Q6N021 2002 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-211ENST00000466538 PTPRTO14522 1441 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGLV4-60A0A075B6I1 120 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 A0A0U1RQV1 116 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 SYCE1LA8MT33 242 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 PDZK1P1A8MUH7 402 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 H7C417 338 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 NME4O00746 187 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 B4GALT5O43286 388 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 ERI3O43414 337 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGKV3-11P04433 115 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 CSNK2A2P19784 350 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 NBL1P41271 181 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 RBM34P42696 430 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 GPR1P46091 355 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 SLC11A1P49279 550 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 UBE2MP61081 183 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 RPS15AP62244 130 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 LOXL1Q08397 574 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 DOC2AQ14183 400 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 H3F3CQ6NXT2 135 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 C12orf54Q6X4T0 127 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 NTM-AS1Q6ZSK4 140 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 HORMAD1Q86X24 394 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 UBALD2Q8IYN6 164 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 MYOCDQ8IZQ8 938 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 VKORC1L1Q8N0U8 176 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR10G2Q8NGC3 310 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR10G6Q8NH81 332 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR51E1Q8TCB6 317 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 RPEQ96AT9 228 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 RNF145Q96MT1 663 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF382Q96SR6 550 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 DEFB129Q9H1M3 183 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 C8orf33Q9H7E9 229 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 C12orf10Q9HB07 376 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 RPRD1BQ9NQG5 326 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 SLC39A1Q9NY26 324 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 MTFP1Q9UDX5 166 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 YARS2Q9Y2Z4 477 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 DENND4AQ7Z401 1863 aa2.68□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGHV3OR16-9A0A0B4J2B5 98 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 A0A0J9YXV3 536 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 A0A1W2PNU3 283 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 H0YC42 278 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 DNASE2O00115 360 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 BPY2O14599 106 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZBTB5O15062 677 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF324O75467 553 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 GCM2O75603 506 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 KRT16P08779 473 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 RAB5AP20339 215 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 MYL9P24844 172 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 CD82P27701 267 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 CDKN2DP55273 166 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 DAOAP59103 153 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF33AQ06730 810 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 DGCR6Q14129 220 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 TFDP2Q14188 446 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 EBI3Q14213 229 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 PTGES3Q15185 160 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 RPEL1Q2QD12 228 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 CAVIN4Q5BKX8 364 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 FAM78AQ5JUQ0 283 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 FBXW9Q5XUX1 488 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 RWDD4Q6NW29 188 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 PRMT9Q6P2P2 845 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 CALHM1Q8IU99 346 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 H1FOOQ8IZA3 346 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 CMTM8Q8IZV2 173 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR2L8Q8NGY9 312 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms