RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CAB39Q9Y376 341 aaPredicted RBP9.65□□□□□ -0.86
VCP-204ENST00000466100 DEFB108AA8MXU0 73 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 PRSS44E7EML9 344 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 M0R135 149 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 M0R1B8 84 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 LALBAP00709 142 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 KRT8P05787 483 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 CCL2P13500 99 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 EEF1B2P24534 225 aaKnown RBP9.64□□□□□ -0.87
VCP-204ENST00000466100 CD40P25942 277 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 APLNRP35414 380 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 WNT5AP41221 380 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 KIR2DL3P43628 341 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 GDI2P50395 445 aaKnown RBP9.64□□□□□ -0.87
VCP-204ENST00000466100 RIDAP52758 137 aaKnown RBP9.64□□□□□ -0.87
VCP-204ENST00000466100 MFGE8Q08431 387 aaPredicted RBP9.64□□□□□ -0.87
VCP-204ENST00000466100 SPOCK1Q08629 439 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 TBC1D28Q2M2D7 210 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 NCMAPQ5T1S8 102 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 XAF1Q6GPH4 301 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 ALKBH2Q6NS38 261 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 COLCA1Q6ZS62 124 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 KCTD20Q7Z5Y7 419 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 KLHL36Q8N4N3 616 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 RPS4Y2Q8TD47 263 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 FAM222BQ8WU58 562 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 SNX33Q8WV41 574 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 SPRYD4Q8WW59 207 aaPredicted RBP9.64□□□□□ -0.87
VCP-204ENST00000466100 RORBQ92753 470 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 SPTSSAQ969W0 71 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 ZNF799Q96GE5 643 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 DCLRE1CQ96SD1 692 aaKnown RBP9.64□□□□□ -0.87
VCP-204ENST00000466100 DOK1Q99704 481 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 SPOCK3Q9BQ16 436 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 MROQ9BYG7 248 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 NIPAL2Q9H841 368 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 FAM206AQ9NX38 181 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 GNG8Q9UK08 70 aa9.64□□□□□ -0.87
VCP-204ENST00000466100 ITPR2Q14571 2701 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.63□□□□□ -0.87
VCP-204ENST00000466100 C5orf49A4QMS7 147 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 C5orf63A6NC05 138 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 E9PI62 339 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 F5H5K5 113 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 J3QLW9 94 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MYL12BO14950 172 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 PNPP00491 289 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MT-ND5P03915 603 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 ZNF19P17023 458 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 PTAFRP25105 342 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 PCSK6P29122 969 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MAP2K4P45985 399 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 CX3CR1P49238 355 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MMP16P51512 607 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 PRKXP51817 358 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 WNT4P56705 351 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 ZNF121P58317 390 aaPredicted RBP9.63□□□□□ -0.87
VCP-204ENST00000466100 EMX1Q04741 257 aaPredicted RBP9.63□□□□□ -0.87
VCP-204ENST00000466100 BSPH1Q075Z2 132 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 DRAM2Q6UX65 266 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 TMEM108Q6UXF1 575 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 TMPRSS11AQ6ZMR5 421 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MEX3BQ6ZN04 569 aaKnown RBP9.63□□□□□ -0.87
VCP-204ENST00000466100 RFPL4BQ6ZWI9 263 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 NAA40Q86UY6 237 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 ZNF101Q8IZC7 436 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 YIPF7Q8N8F6 280 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 IL17RDQ8NFM7 739 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 TSPAN14Q8NG11 270 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 OR1J2Q8NGS2 313 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MRPL48Q96GC5 212 aaKnown RBP9.63□□□□□ -0.87
VCP-204ENST00000466100 OR5M11Q96RB7 305 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 TMEM204Q9BSN7 226 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 MND1Q9BWT6 205 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 C1QTNF5Q9BXJ0 243 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 CCDC90BQ9GZT6 254 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 NGBQ9NPG2 151 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 ACOT13Q9NPJ3 140 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 G6PC2Q9NQR9 355 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 ERGIC3Q9Y282 383 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 GRIP1Q9Y3R0 1128 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 R4GMQ9 66 aa9.63□□□□□ -0.87
VCP-204ENST00000466100 ASH1LQ9NR48 2969 aaKnown RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 A1L4Q6 167 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 ATP6V1G2-DDX39BF2Z307 99 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 SMPD2O60906 423 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 LCKP06239 509 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 TACSTD2P09758 323 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 SLC2A1P11166 492 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 HSD11B1P28845 292 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 PSMB10P40306 273 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 KIR3DL2P43630 455 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 TGM4P49221 684 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 TPTEP56180 551 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 NANOS3P60323 173 aaKnown RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 NKX6-1P78426 367 aaPredicted RBP9.62□□□□□ -0.87
VCP-204ENST00000466100 GALK2Q01415 458 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 ACSM1Q08AH1 577 aa9.62□□□□□ -0.87
VCP-204ENST00000466100 DAZAP2Q15038 168 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms