RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CD200R1LQ6Q8B3 271 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 UNQ9370/PRO34162Q6UXP9 181 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 B3GLCTQ6Y288 498 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 SEM1Q6ZVN7 128 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 DPY19L4Q7Z388 723 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 P4HA3Q7Z4N8 544 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 LHFPL3Q86UP9 236 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 SATL1Q86VE3 508 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TUSC5Q8IXB3 177 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ZNF679Q8IYX0 411 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 GPR137CQ8N3F9 429 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 MS4A15Q8N5U1 240 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 SYT14Q8NB59 555 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 GJC3Q8NFK1 279 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 OR10H4Q8NGA5 316 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 OR51L1Q8NGJ5 315 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 OR6K6Q8NGW6 343 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 OR6K3Q8NGY3 331 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ST7LQ8TDW4 575 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 RAB2BQ8WUD1 216 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 CHAC2Q8WUX2 184 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 SNX33Q8WV41 574 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 RNF133Q8WVZ7 376 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 SPRYD4Q8WW59 207 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 NABP1Q96AH0 204 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TMIGD2Q96BF3 282 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 OPALINQ96PE5 141 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 OR5M11Q96RB7 305 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TTYH2Q9BSA4 534 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ABHD6Q9BV23 337 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ULBP2Q9BZM5 246 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TP63Q9H3D4 680 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 GPR35Q9HC97 309 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ZNF71Q9NQZ8 489 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 SLC7A10Q9NS82 523 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TMEM38BQ9NVV0 291 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 MALT1Q9UDY8 824 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ATPIF1Q9UII2 106 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 LAMP5Q9UJQ1 280 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 COPS3Q9UNS2 423 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 NCOA6Q14686 2063 aaPredicted RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 DCHS1Q96JQ0 3298 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 PHF3Q92576 2039 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 TRDV1A0A1B0GX56 115 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 TVP23AA6NH52 213 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 FAM171A2A8MVW0 826 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 SELENOFO60613 162 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 SC5DO75845 299 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 GATBO75879 557 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 TOXO94900 526 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 GABARAPO95166 117 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 FARS2O95363 451 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 CGAP01215 116 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 APOC1P02654 83 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 KRT8P05787 483 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR8G3PP0DMU2 310 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 CD36P16671 472 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 PSMB9P28065 219 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OTX1P32242 354 aaPredicted RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 LIPAP38571 399 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR12D2P58182 307 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 PCBD1P61457 104 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 SIRPAP78324 504 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 FMODQ06828 376 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ECH1Q13011 328 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 AQP6Q13520 282 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ENDOGQ14249 297 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 SSX1Q16384 188 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 C1orf185Q5T7R7 199 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR2G6Q5TZ20 316 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 RTL6Q6ICC9 239 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ZNF544Q6NX49 715 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 TFAP2EQ6VUC0 442 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 LINC00299Q6ZSB3 139 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 Q6ZSR3 168 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 SSX8Q7RTT4 187 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 SSX6Q7RTT6 188 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 NUFIP2Q7Z417 695 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 DOLPP1Q86YN1 238 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ERI1Q8IV48 349 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 PHC2Q8IXK0 858 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ZNF100Q8IYN0 542 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 SLC22A24Q8N4F4 322 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ST6GALNAC3Q8NDV1 305 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 CCDC54Q8NEL0 328 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 C1orf162Q8NEQ5 155 aaPredicted RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR10H5Q8NGA6 315 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR6N2Q8NGY6 317 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR2AJ1Q8NGZ0 328 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR52N5Q8NH56 324 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 THRSPQ92748 146 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 UFD1Q92890 307 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 APH1AQ96BI3 265 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 PELI1Q96FA3 418 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 DACH2Q96NX9 599 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 TRIB1Q96RU8 372 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 FUNDC2Q9BWH2 189 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 RBM24Q9BX46 236 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 MROQ9BYG7 248 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 OR10A4Q9H209 315 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms