RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 PIWIL3Q7Z3Z3 882 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ABHD12BQ7Z5M8 362 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 OAFQ86UD1 273 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ZDHHC21Q8IVQ6 265 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 CDK20Q8IZL9 346 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 RNF113BQ8IZP6 322 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 MUC15Q8N387 334 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC22A24Q8N4F4 322 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF525Q8N782 197 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 OR9Q2Q8NGE9 314 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 OR4C15Q8NGM1 316 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 BCAS4Q8TDM0 211 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 NSMAFQ92636 917 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 GTF3AQ92664 365 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 HIST1H2ACQ93077 130 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 CCDC124Q96CT7 223 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ADAD1Q96M93 576 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 NSMCE2Q96MF7 247 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 THAP7Q9BT49 309 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 KATNB1Q9BVA0 655 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 MRPL37Q9BZE1 423 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 PLA2G12AQ9BZM1 189 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 IL1RAPQ9NPH3 570 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 CBLN4Q9NTU7 201 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 ACTR3BQ9P1U1 418 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 POU2F3Q9UKI9 436 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 FZR1Q9UM11 496 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 SAMD4AQ9UPU9 718 aaKnown RBP4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 MGAT4BQ9UQ53 548 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 POFUT2Q9Y2G5 429 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 LYVE1Q9Y5Y7 322 aa4.11□□□□□ -1.75
EXOSC3-204ENST00000465860 TEX13CA0A0J9YWL9 993 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC22A23A1A5C7 686 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 NPIPB13A6NJU9 1138 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 NPIPB4C9JG80 1138 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 LYNX1G3V0Z9 82 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SOCS2O14508 198 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 NDUFAB1O14561 156 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ARHGEF9O43307 516 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SSX4O60224 188 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 GADD45GO95257 159 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 MPZL1O95297 269 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 PPP1R3DO95685 299 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CLPTM1O96005 669 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 IGHG1P01857 330 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CRYAAP02489 173 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 FABP3P05413 133 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CD14P08571 375 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 LYNX1P0DP58 116 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CTLA4P16410 223 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF32P17041 273 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CALB2P22676 271 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 LAP3P28838 519 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ARR3P36575 388 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CDKN2AP42771 156 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 GSSP48637 474 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 UCP3P55916 312 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 TPTEP56180 551 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 PSG4Q00888 419 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CD47Q08722 323 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 DAG1Q14118 895 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 MAD2L1BPQ15013 274 aaPredicted RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SGCAQ16586 387 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 MEP1BQ16820 701 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CLEC12BQ2HXU8 276 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ZIK1Q3SY52 487 aaPredicted RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SPRNQ5BIV9 151 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 PABPC1L2AQ5JQF8 200 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF770Q6IQ21 691 aaPredicted RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF544Q6NX49 715 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 PGBD2Q6P3X8 592 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 PRSS57Q6UWY2 283 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 TRPM8Q7Z2W7 1104 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF101Q8IZC7 436 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 HS3ST5Q8IZT8 346 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 FBXL14Q8N1E6 418 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SVOPLQ8N434 492 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ARIH2OSQ8N7S6 290 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 OR8D4Q8NGM9 314 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 AKR7LQ8NHP1 331 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC7A6Q92536 515 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SLCO4A1Q96BD0 722 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 DAZAP1Q96EP5 407 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 RSRC1Q96IZ7 334 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 C18orf12Q96KH6 178 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 SAMD8Q96LT4 415 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 THTPAQ9BU02 230 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF416Q9BWM5 594 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CADM1Q9BY67 442 aaKnown RBP4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 KRTAP1-5Q9BYS1 174 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 WNT5BQ9H1J7 359 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 OR51B6Q9H340 312 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 OR52D1Q9H346 318 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 FN3KQ9H479 309 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 ANKRD19PQ9H560 264 aa4.1□□□□□ -1.75
EXOSC3-204ENST00000465860 CXorf56Q9H5V9 222 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms