RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 TPTEP56180 551 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 SELENOVP59797 346 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 SNRPGP62308 76 aaKnown RBP17.41■□□□□ 0.38
PTCD3-206ENST00000465560 GRB2P62993 217 aaKnown RBP17.41■□□□□ 0.38
PTCD3-206ENST00000465560 SLC25A30Q5SVS4 291 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 COLCA1Q6ZS62 124 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF771Q7L3S4 317 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-206ENST00000465560 KLF14Q8TD94 323 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-206ENST00000465560 UBE2FQ969M7 185 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF799Q96GE5 643 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF582Q96NG8 517 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-206ENST00000465560 AMELYQ99218 206 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 KCNJ15Q99712 375 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 C1QTNF5Q9BXJ0 243 aa17.41■□□□□ 0.38
PTCD3-206ENST00000465560 A0A1W2PPW3 197 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 M0R233 179 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 IGHV3-13P01766 116 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 ALOX5APP20292 161 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 GCH1P30793 250 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 MPV17P39210 176 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 SLC15A1P46059 708 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 TMED1Q13445 227 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 TAF13Q15543 124 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 SPATC1Q76KD6 591 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 KRTAP1-3Q8IUG1 177 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 ZNF555Q8NEP9 628 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 THEM6Q8WUY1 208 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 RFKQ969G6 155 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 POFUT1Q9H488 388 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 ADGRL4Q9HBW9 690 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 DYNLRB1Q9NP97 96 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 SLCO1C1Q9NYB5 712 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 LAMP5Q9UJQ1 280 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 KLHDC2Q9Y2U9 406 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 STARD10Q9Y365 291 aa17.4■□□□□ 0.38
PTCD3-206ENST00000465560 MAP1AP78559 2803 aaPredicted RBP17.39■□□□□ 0.38
PTCD3-206ENST00000465560 NDUFS7O75251 213 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 IGHV4-39P01824 125 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 GABRB1P18505 474 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 OPRL1P41146 370 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 OCLNQ16625 522 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 Q5PR19 223 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 MEDAGQ5VYS4 303 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 SHEQ5VZ18 495 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 PRSS57Q6UWY2 283 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 DRAM2Q6UX65 266 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 ENTHD1Q8IYW4 607 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 OR5L1Q8NGL2 311 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 BARX1Q9HBU1 254 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-206ENST00000465560 TMEM14AQ9Y6G1 99 aa17.39■□□□□ 0.37
PTCD3-206ENST00000465560 ZNF469Q96JG9 3925 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-206ENST00000465560 MPZL2O60487 215 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 SBK2P0C263 348 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 HSD11B1P28845 292 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 ALDH3B1P43353 468 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 SLC6A9P48067 706 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 PRKXP51817 358 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 HCCSP53701 268 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 POU4F2Q12837 409 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 MAD2L1BPQ15013 274 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-206ENST00000465560 MOGQ16653 247 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 TMEM255AQ5JRV8 349 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 SPNS3Q6ZMD2 512 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 NAA40Q86UY6 237 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 OR51G2Q8NGK0 314 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 SORCS2Q96PQ0 1159 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 MNTQ99583 582 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 VRK1Q99986 396 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-206ENST00000465560 VCXQ9H320 206 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 TAAR3PQ9P1P4 343 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 GPR160Q9UJ42 338 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTCD3-206ENST00000465560 ITPR3Q14573 2671 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 CELSR1Q9NYQ6 3014 aa17.38■□□□□ 0.37
PTCD3-206ENST00000465560 ENTPD6O75354 484 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 LCATP04180 440 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 ADRA2AP08913 450 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 H2BFMP0C1H6 154 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 NKPD1Q17RQ9 610 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 TTC23Q5W5X9 447 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 SLC35F2Q8IXU6 374 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 RHOXF1Q8NHV9 184 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 APOL4Q9BPW4 351 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 RAB1BQ9H0U4 201 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 MS4A5Q9H3V2 200 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 CLN6Q9NWW5 311 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 PTTG3PQ9NZH4 202 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 COPS3Q9UNS2 423 aa17.37■□□□□ 0.37
PTCD3-206ENST00000465560 PHYHO14832 338 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 APOC1P02654 83 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 CX3CR1P49238 355 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 EFNA4P52798 201 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 PSG7Q13046 419 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 KCTD18Q6PI47 426 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-206ENST00000465560 LRRN1Q6UXK5 716 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 FBXW12Q6X9E4 464 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 ZCCHC24Q8N2G6 241 aaKnown RBP17.36■□□□□ 0.37
PTCD3-206ENST00000465560 DHRSXQ8N5I4 330 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 ZNF283Q8N7M2 679 aa17.36■□□□□ 0.37
PTCD3-206ENST00000465560 SNX33Q8WV41 574 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms