RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 NKPD1Q17RQ9 610 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 SPATC1Q76KD6 591 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 SLC16A9Q7RTY1 509 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 NAA40Q86UY6 237 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 GID4Q8IVV7 300 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 OTOSQ8NHW6 89 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 FAM81AQ8TBF8 368 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 SORCS2Q96PQ0 1159 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 MBOAT4Q96T53 435 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 COPS4Q9BT78 406 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 C1QTNF5Q9BXJ0 243 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 POFUT1Q9H488 388 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 IMPAD1Q9NX62 359 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 HIVEP1P15822 2718 aa12.43□□□□□ -0.42
SQSTM1-205ENST00000464493 M0R135 149 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 LCATP04180 440 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 LYNP07948 512 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 NAT2P11245 290 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 OTX1P32242 354 aaPredicted RBP12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 GRB2P62993 217 aaKnown RBP12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 PSG7Q13046 419 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 LRRC36Q1X8D7 754 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 CLEC12BQ2HXU8 276 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 ALKBH6Q3KRA9 238 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 LPCAT4Q643R3 524 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 DRAM2Q6UX65 266 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 COLCA1Q6ZS62 124 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 RHOUQ7L0Q8 258 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 GALNT4Q8N4A0 578 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 SNX33Q8WV41 574 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 RNF133Q8WVZ7 376 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 NEU4Q8WWR8 484 aaPredicted RBP12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 CMBLQ96DG6 245 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF799Q96GE5 643 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 Q96MF0 132 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 AMELYQ99218 206 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 YIPF3Q9GZM5 350 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 DCLRE1BQ9H816 532 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 C8orf4Q9NR00 106 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 GMPPBQ9Y5P6 360 aa12.42□□□□□ -0.42
SQSTM1-205ENST00000464493 LOC100130705A0A1B0GUX0 176 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 LY6HO94772 140 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 MT-ND5P03915 603 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 MRPL3P09001 348 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 SLC6A9P48067 706 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 PRKXP51817 358 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 HCCSP53701 268 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 GGTLC2Q14390 218 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 UBE2FQ969M7 185 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 HAVCR1Q96D42 359 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 RDH12Q96NR8 316 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 CNN2Q99439 309 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 TPK1Q9H3S4 243 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 FAM118AQ9NWS6 357 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 SMPD3Q9NY59 655 aaPredicted RBP12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 HAO2Q9NYQ3 351 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 PTTG3PQ9NZH4 202 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 LAMP5Q9UJQ1 280 aa12.41□□□□□ -0.42
SQSTM1-205ENST00000464493 FLNAP21333 2647 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 C17orf100A8MU93 164 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 TIMM8AO60220 97 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 RAC2P15153 192 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 ALOX5APP20292 161 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 PEX2P28328 305 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 HSD11B1P28845 292 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 HTR1FP30939 366 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 LIPAP38571 399 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 OPRL1P41146 370 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 MMP15P51511 669 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 DSCR9P59020 149 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 SNRPGP62308 76 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 MALLQ13021 153 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 HLXQ14774 488 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 SLC25A30Q5SVS4 291 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 DNM1P46Q6ZS02 220 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF525Q8N782 197 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 PACRGLQ8N7B6 248 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF283Q8N7M2 679 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 RFKQ969G6 155 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 ZNF582Q96NG8 517 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 ADGRL4Q9HBW9 690 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 CYSLTR2Q9NS75 346 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 DNAJC27Q9NZQ0 273 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 WARS2Q9UGM6 360 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 PURGQ9UJV8 347 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 KLHDC2Q9Y2U9 406 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 TMEM14AQ9Y6G1 99 aa12.4□□□□□ -0.42
SQSTM1-205ENST00000464493 CHD3Q12873 2000 aaKnown RBP12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 PLSCR5A0PG75 271 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 TRIM64A6NGJ6 449 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 TRIM64BA6NI03 449 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 DLGAP1O14490 977 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 CASQ2O14958 399 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms