RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 CMYA5Q8N3K9 4069 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 SPRY1O43609 319 aaPredicted RBP12.15□□□□□ -0.46
ALMS1-202ENST00000464408 HLA-DPB1P04440 258 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 WNT2P09544 360 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 IGHV4-38-2P0DP08 117 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 HIST1H1CP16403 213 aaKnown RBP12.15□□□□□ -0.46
ALMS1-202ENST00000464408 SPIBQ01892 262 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 KRTAP27-1Q3LI81 207 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 DOK3Q7L591 496 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 NAA40Q86UY6 237 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 MOGAT3Q86VF5 341 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 SLC26A10Q8NG04 563 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 APOBEC3DQ96AK3 386 aaPredicted RBP12.15□□□□□ -0.46
ALMS1-202ENST00000464408 COG8Q96MW5 612 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 COQ7Q99807 217 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 ELAC2Q9BQ52 826 aaKnown RBP12.15□□□□□ -0.46
ALMS1-202ENST00000464408 SLC30A2Q9BRI3 323 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 TMEM165Q9HC07 324 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
ALMS1-202ENST00000464408 ADA2Q9NZK5 511 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 ATPIF1Q9UII2 106 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 NUP50Q9UKX7 468 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 SAMD4AQ9UPU9 718 aaKnown RBP12.15□□□□□ -0.46
ALMS1-202ENST00000464408 PCDHGB1Q9Y5G3 927 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
ALMS1-202ENST00000464408 OR6C68A6NDL8 312 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 SURF4O15260 269 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 ACSM4P0C7M7 580 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 PSKH1P11801 424 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 RPS2P15880 293 aaKnown RBP12.14□□□□□ -0.47
ALMS1-202ENST00000464408 RGS6P49758 472 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 PAX8Q06710 450 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 COX10Q12887 443 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 RFX4Q33E94 735 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 ESCO2Q56NI9 601 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 SLC18B1Q6NT16 456 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 C19orf18Q8NEA5 215 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 SDR9C7Q8NEX9 313 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 GJC3Q8NFK1 279 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
ALMS1-202ENST00000464408 TMEM246Q9BRR3 403 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 HDHD2Q9H0R4 259 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 NTN4Q9HB63 628 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 PNRC2Q9NPJ4 139 aaKnown RBP12.14□□□□□ -0.47
ALMS1-202ENST00000464408 DDX28Q9NUL7 540 aaKnown RBP12.14□□□□□ -0.47
ALMS1-202ENST00000464408 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
ALMS1-202ENST00000464408 C5orf63A6NC05 138 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 F5H5K5 113 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 J3QW42 95 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 NDUFAB1O14561 156 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 WIPF1O43516 503 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 GADD45GO95257 159 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 CRABP1P29762 137 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 GGT2P36268 569 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 GK2Q14410 553 aaPredicted RBP12.13□□□□□ -0.47
ALMS1-202ENST00000464408 KRT72Q14CN4 511 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 HSP90B2PQ58FF3 399 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 DNM1P34Q6PK57 102 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 LYPD4Q6UWN0 246 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 LYPD2Q6UXB3 125 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 KLBQ86Z14 1044 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
ALMS1-202ENST00000464408 OR5L1Q8NGL2 311 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 ZNRF4Q8WWF5 429 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 DACT3Q96B18 629 aaPredicted RBP12.13□□□□□ -0.47
ALMS1-202ENST00000464408 CMTM5Q96DZ9 223 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 PYURFQ96I23 114 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 MRI1Q9BV20 369 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
ALMS1-202ENST00000464408 FAM107BQ9H098 131 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 MRPL22Q9NWU5 206 aaKnown RBP12.13□□□□□ -0.47
ALMS1-202ENST00000464408 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
ALMS1-202ENST00000464408 MDFIC2A0A1B0GVS7 189 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 A0A1B0GWJ7 208 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 OR10H3O60404 316 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 RENP00797 406 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 HKR1P10072 659 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 PRTN3P24158 256 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 FPR3P25089 353 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 SLC6A6P31641 620 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 RPS27P42677 84 aaKnown RBP12.12□□□□□ -0.47
ALMS1-202ENST00000464408 SRP9P49458 86 aaKnown RBP12.12□□□□□ -0.47
ALMS1-202ENST00000464408 TRAP1Q12931 704 aaKnown RBP12.12□□□□□ -0.47
ALMS1-202ENST00000464408 BAMBIQ13145 260 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 SLC27A4Q6P1M0 643 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 RBMS3Q6XE24 437 aaKnown RBP12.12□□□□□ -0.47
ALMS1-202ENST00000464408 ZBTB46Q86UZ6 589 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 PARP8Q8N3A8 854 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 OR10S1Q8NGN2 331 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 ZMYND19Q96E35 227 aaPredicted RBP12.12□□□□□ -0.47
ALMS1-202ENST00000464408 MAP6Q96JE9 813 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 PITX2Q99697 317 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms