RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SOCS2O14508 198 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 SELEP16581 610 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 PITPNBP48739 271 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 FKBP9P1Q75LS8 142 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 FITM2Q8N6M3 262 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 RCN3Q96D15 328 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 GPX7Q96SL4 187 aaPredicted RBP18.86■□□□□ 0.61
USP4-208ENST00000464168 ANKRD19PQ9H560 264 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 WDR76Q9H967 626 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 TMEM100Q9NV29 134 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 AP3M1Q9Y2T2 418 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 LHFPL6Q9Y693 200 aa18.86■□□□□ 0.61
USP4-208ENST00000464168 CXCR6O00574 342 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 HLA-DPB1P04440 258 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 TROVE2P10155 538 aaKnown RBP eCLIP18.85■□□□□ 0.61
USP4-208ENST00000464168 CDKN2AP42771 156 aaKnown RBP18.85■□□□□ 0.61
USP4-208ENST00000464168 LIPEQ05469 1076 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 SRSF4Q08170 494 aaKnown RBP18.85■□□□□ 0.61
USP4-208ENST00000464168 LYPD2Q6UXB3 125 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 ZNF841Q6ZN19 808 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 COLCA1Q6ZS62 124 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 NLRC3Q7RTR2 1065 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 ADCK1Q86TW2 530 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 C1orf87Q8N0U7 546 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 GJC3Q8NFK1 279 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 HSH2DQ96JZ2 352 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 TSSK2Q96PF2 358 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 COQ7Q99807 217 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 CDADC1Q9BWV3 514 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 POLR1DQ9Y2S0 133 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 IER3IP1Q9Y5U9 82 aa18.85■□□□□ 0.61
USP4-208ENST00000464168 FAM181BA6NEQ2 426 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 DCTN6O00399 190 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 GATA4P43694 442 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 FXYD6P3P58550 94 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 FGF12P61328 243 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 MEP1BQ16820 701 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 MIDNQ504T8 468 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 WDR25Q64LD2 544 aaPredicted RBP18.84■□□□□ 0.61
USP4-208ENST00000464168 CGB2Q6NT52 195 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 CORO6Q6QEF8 472 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 HDXQ7Z353 690 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.84■□□□□ 0.61
USP4-208ENST00000464168 ZDHHC16Q969W1 377 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 HDHD2Q9H0R4 259 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 CLN8Q9UBY8 286 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 CAPN7Q9Y6W3 813 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 ENPP4Q9Y6X5 453 aa18.84■□□□□ 0.61
USP4-208ENST00000464168 PRKDCP78527 4128 aaKnown RBP18.84■□□□□ 0.61
USP4-208ENST00000464168 SRRM5B3KS81 715 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 TXNDC12O95881 172 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 SERPINA1P01009 418 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 FPR3P25089 353 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 OMPP47874 163 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 PRSS12P56730 875 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 MAB21L1Q13394 359 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 OCLNQ16625 522 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 KRTAP27-1Q3LI81 207 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 DPY19L2P2Q6ZN68 376 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 DCDC5Q6ZRR9 648 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 ARPINQ7Z6K5 226 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 HCAR1Q9BXC0 346 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 FGFR1OP2Q9NVK5 253 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 RPS6KA6Q9UK32 745 aa18.83■□□□□ 0.6
USP4-208ENST00000464168 A0A1B0GUS0 222 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 A0A1W2PRQ8 180 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 C22orf46C9J442 243 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 PHYHO14832 338 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 GSTA4O15217 222 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 CENPAP49450 140 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 BPIFB3P59826 476 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 COX10Q12887 443 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 DGCR6Q14129 220 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 Q6YL49 198 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 CYP4Z1Q86W10 505 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 KIR3DL3Q8N743 410 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 CELF2-AS1Q8N7Q2 184 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 C19orf18Q8NEA5 215 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 Q8TCH9 128 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 WFDC12Q8WWY7 111 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 RSRC1Q96IZ7 334 aaKnown RBP18.82■□□□□ 0.6
USP4-208ENST00000464168 VIPAS39Q9H9C1 493 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 TNFRSF19Q9NS68 423 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 PDP1Q9P0J1 537 aaPredicted RBP18.82■□□□□ 0.6
USP4-208ENST00000464168 ARMCX1Q9P291 453 aa18.82■□□□□ 0.6
USP4-208ENST00000464168 IGLV1-36A0A0B4J1U3 117 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 NME4O00746 187 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 KNG1P01042 644 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 H1F0P07305 194 aaKnown RBP18.81■□□□□ 0.6
USP4-208ENST00000464168 CRABP1P29762 137 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 PSMB10P40306 273 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 RELBQ01201 579 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 DBPQ10586 325 aaPredicted RBP18.81■□□□□ 0.6
USP4-208ENST00000464168 GK2Q14410 553 aaPredicted RBP18.81■□□□□ 0.6
USP4-208ENST00000464168 CLEC12AQ5QGZ9 265 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 ZNF362Q5T0B9 420 aaPredicted RBP18.81■□□□□ 0.6
USP4-208ENST00000464168 GPR157Q5UAW9 335 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 PGM2L1Q6PCE3 622 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 ERGIC1Q969X5 290 aa18.81■□□□□ 0.6
USP4-208ENST00000464168 MARCH7Q9H992 704 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms