RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SPATS1Q496A3 300 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 SLC35F1Q5T1Q4 408 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 SLC18B1Q6NT16 456 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 ZBTB46Q86UZ6 589 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 ZDHHC21Q8IVQ6 265 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 DEFB107AQ8IZN7 70 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 OR2AJ1Q8NGZ0 328 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 PITX2Q99697 317 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 GCM1Q9NP62 436 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 NDE1Q9NXR1 346 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 WNK2Q9Y3S1 2297 aa15.87■□□□□ 0.13
SF3A1-205ENST00000463818 F5H5K5 113 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 HLA-DQA2P01906 255 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 SLC6A9P48067 706 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 MNAT1P51948 309 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 MXRA7P84157 204 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 KRTAP27-1Q3LI81 207 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 PGBD2Q6P3X8 592 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 C16orf89Q6UX73 402 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 COLCA1Q6ZS62 124 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 SDR9C7Q8NEX9 313 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 OR10AD1Q8NGE0 317 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 OR52E2Q8NGJ4 325 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 MEGF10Q96KG7 1140 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 SLC30A2Q9BRI3 323 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 SUCNR1Q9BXA5 334 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 C1QTNF5Q9BXJ0 243 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 FN3KQ9H479 309 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 WDR76Q9H967 626 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 CYB5R1Q9UHQ9 305 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 ARHGAP32A7KAX9 2087 aa15.86■□□□□ 0.13
SF3A1-205ENST00000463818 IQCF6A8MYZ5 107 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 TRAPPC2LH3BP13 241 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 TRIM77I1YAP6 450 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 IFNL4K9M1U5 179 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 KRT36O76013 467 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 ACSM4P0C7M7 580 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 GGT2P36268 569 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 MDH2P40926 338 aaKnown RBP15.85■□□□□ 0.13
SF3A1-205ENST00000463818 SRP9P49458 86 aaKnown RBP15.85■□□□□ 0.13
SF3A1-205ENST00000463818 MMP16P51512 607 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 HMGA2P52926 109 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 SEC61A1P61619 476 aaKnown RBP15.85■□□□□ 0.13
SF3A1-205ENST00000463818 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.85■□□□□ 0.13
SF3A1-205ENST00000463818 ECH1Q13011 328 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 ZNF620Q6ZNG0 422 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 CFAP77Q6ZQR2 320 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 NAA40Q86UY6 237 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 BPIFB2Q8N4F0 458 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 BHLHE23Q8NDY6 225 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 ZNF420Q8TAQ5 688 aaPredicted RBP15.85■□□□□ 0.13
SF3A1-205ENST00000463818 JMJD8Q96S16 334 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 SLC6A7Q99884 636 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 HCAR1Q9BXC0 346 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 TMEM165Q9HC07 324 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 TMEM100Q9NV29 134 aa15.85■□□□□ 0.13
SF3A1-205ENST00000463818 POLR3KQ9Y2Y1 108 aaPredicted RBP15.85■□□□□ 0.13
SF3A1-205ENST00000463818 IGHV3-64DA0A0J9YX35 117 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 F5H0A9 414 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-205ENST00000463818 TNFRSF11BO00300 401 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 MLNRO43193 412 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 ZNF205O95201 554 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 CYB5R3P00387 301 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-205ENST00000463818 FSHBP01225 129 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 SELEP16581 610 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 FPR2P25090 351 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 CLEC12AQ5QGZ9 265 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 CYP2R1Q6VVX0 501 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 DEFB108BQ8NET1 73 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 BCAS4Q8TDM0 211 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 FAM216AQ8WUB2 273 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 C22orf15Q8WYQ4 148 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 DDOQ99489 341 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 EGLN3Q9H6Z9 239 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 MRPL22Q9NWU5 206 aaKnown RBP15.84■□□□□ 0.13
SF3A1-205ENST00000463818 LYVE1Q9Y5Y7 322 aa15.84■□□□□ 0.13
SF3A1-205ENST00000463818 DYSFO75923 2080 aa15.83■□□□□ 0.13
SF3A1-205ENST00000463818 F5H5P2 479 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 LCATP04180 440 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 WNT2P09544 360 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 T-ENOLP0DO92 83 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF12P17014 697 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 CALB2P22676 271 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 PYCR1P32322 319 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 PRSS12P56730 875 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 ACTG1P63261 375 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 TRAP1Q12931 704 aaKnown RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF154Q13106 437 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 MOGAT3Q86VF5 341 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 MUC20Q8N307 709 aaPredicted RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 CYB561A3Q8NBI2 242 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 OR9Q2Q8NGE9 314 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 GCDHQ92947 438 aaPredicted RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 DVL3Q92997 716 aaPredicted RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 POP5Q969H6 163 aaKnown RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 SLCO4A1Q96BD0 722 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 ATF6BQ99941 703 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 RBM4Q9BWF3 364 aaKnown RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 PNRC2Q9NPJ4 139 aaKnown RBP15.83■□□□□ 0.12
SF3A1-205ENST00000463818 AUP1Q9Y679 476 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms