RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 NEDD8Q15843 81 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 CCDC58Q4VC31 144 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 NAA40Q86UY6 237 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-202ENST00000463060 IL17RDQ8NFM7 739 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 HAVCR2Q8TDQ0 301 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 MUCL1Q96DR8 90 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 WFIKKN1Q96NZ8 548 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 OPALINQ96PE5 141 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 G6PC2Q9NQR9 355 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-202ENST00000463060 FAM206AQ9NX38 181 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 SCOCQ9UIL1 159 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 GRIP1Q9Y3R0 1128 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 R4GMQ9 66 aa12.45□□□□□ -0.42
COL6A1-202ENST00000463060 HELZ2Q9BYK8 2649 aaKnown RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 USP9XQ93008 2570 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 IGHV1-18A0A0C4DH31 117 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 ACOD1A6NK06 481 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 RNF224P0DH78 156 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 STOMP27105 288 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 HOXC12P31275 282 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 HTR5AP47898 357 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 CCR9P51686 369 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 PRKXP51817 358 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 NR1H2P55055 460 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 PSMA6P60900 246 aaKnown RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 MFGE8Q08431 387 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 MLLT11Q13015 90 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 DMKNQ6E0U4 476 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 CATSPERDQ86XM0 798 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 PRSS35Q8N3Z0 413 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 OR2G2Q8NGZ5 317 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 DCLRE1CQ96SD1 692 aaKnown RBP12.44□□□□□ -0.42
COL6A1-202ENST00000463060 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 FRRS1LQ9P0K9 344 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
COL6A1-202ENST00000463060 IQCMA0A1B0GVH7 501 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 TMEM269A0A1B0GVZ9 245 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 C5orf63A6NC05 138 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 PLPP2O43688 288 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 RPP14O95059 124 aaKnown RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 CD1AP06126 327 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 CECR9P0C854 216 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF35P13682 527 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 CPEP16870 476 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 IGFBP2P18065 325 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 RPL5P46777 297 aaKnown RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 TPTEP56180 551 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 GALK2Q01415 458 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 GPR50Q13585 617 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 BLMHQ13867 455 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 TAF13Q15543 124 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 SSX1Q16384 188 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 TIGD6Q17RP2 521 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 ARMCX4Q5H9R4 360 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 DRAM2Q6UX65 266 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 FAM220AQ7Z4H9 259 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 PAQR4Q8N4S7 273 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 ACBD4Q8NC06 268 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 SPTSSAQ969W0 71 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 PPP1R14AQ96A00 147 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 TMIGD2Q96BF3 282 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 C4orf45Q96LM5 186 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 DOK1Q99704 481 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 C1QTNF5Q9BXJ0 243 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 TRIM36Q9NQ86 728 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF319Q9P2F9 582 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 SF3B6Q9Y3B4 125 aaKnown RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 SPTBN1Q01082 2364 aaKnown RBP12.43□□□□□ -0.42
COL6A1-202ENST00000463060 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
COL6A1-202ENST00000463060 F5H5K5 113 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 M0R135 149 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 IGLV3-1P01715 115 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 APOC1P02654 83 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 EPXP11678 715 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 CCL2P13500 99 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 HSD11B1P28845 292 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 LIPAP38571 399 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 CX3CR1P49238 355 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF121P58317 390 aaPredicted RBP12.42□□□□□ -0.42
COL6A1-202ENST00000463060 TAS2R43P59537 309 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 ALKBH1Q13686 389 aaKnown RBP12.42□□□□□ -0.42
COL6A1-202ENST00000463060 CDK5R1Q15078 307 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF829Q3KNS6 432 aaPredicted RBP12.42□□□□□ -0.42
COL6A1-202ENST00000463060 WDR38Q5JTN6 314 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 PHC2Q8IXK0 858 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 ELMOD2Q8IZ81 293 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF283Q8N7M2 679 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 SLC30A7Q8NEW0 376 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 OR13F1Q8NGS4 319 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF799Q96GE5 643 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms