RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
SND1-203ENST00000463020 VCX3AQ9NNX9 186 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 USE1Q9NZ43 259 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 ANGPT4Q9Y264 503 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 COMMD3-BMI1R4GMX3 469 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 TRAV40A0A0B4J280 105 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 TRAPPC13A5PLN9 417 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 CEACAM18A8MTB9 384 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 MCIDASD6RGH6 385 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 DLGAP1O14490 977 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 ICMTO60725 284 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 E2F6O75461 281 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 ZNF682O95780 498 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 TFAP2AP05549 437 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 LAP3P28838 519 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 ARHGDIAP52565 204 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 ESRRGP62508 458 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 SLC3A1Q07837 685 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 ENDOGQ14249 297 aaKnown RBP13.13□□□□□ -0.31
SND1-203ENST00000463020 DEFB112Q30KQ8 113 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 RFX4Q33E94 735 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 TMEM155Q4W5P6 130 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 OTPQ5XKR4 325 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 C9orf139Q6ZV77 190 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 OR2Z1Q8NG97 314 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 ZDHHC8Q9ULC8 765 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 PCDHGB5Q9Y5G0 923 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
SND1-203ENST00000463020 KMT2CQ8NEZ4 4911 aaKnown RBP13.12□□□□□ -0.31
SND1-203ENST00000463020 IGHV3-64DA0A0J9YX35 117 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 A0A1W2PRG6 482 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
SND1-203ENST00000463020 PIP5K1CO60331 668 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 OR7A10O76100 309 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 HIST1H2ABP04908 130 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 TSPAN19P0C672 248 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 MMP16P51512 607 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 RAD23AP54725 363 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 ADARB1P78563 741 aaKnown RBP13.12□□□□□ -0.31
SND1-203ENST00000463020 HOXA4Q00056 320 aaPredicted RBP13.12□□□□□ -0.31
SND1-203ENST00000463020 LAPTM4AQ15012 233 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
SND1-203ENST00000463020 C16orf87Q6PH81 154 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 ZDHHC21Q8IVQ6 265 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 KLHL36Q8N4N3 616 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 SPICQ8N5J4 248 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 C4orf45Q96LM5 186 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 DIRC2Q96SL1 478 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 INIPQ9NRY2 104 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 CYSLTR2Q9NS75 346 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 EIF3KQ9UBQ5 218 aaKnown RBP13.12□□□□□ -0.31
SND1-203ENST00000463020 MMP24Q9Y5R2 645 aa13.12□□□□□ -0.31
SND1-203ENST00000463020 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 ALPLP05186 524 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 WNT2P09544 360 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 GSTT1P30711 240 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 KDELR2P33947 212 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 TOP3AQ13472 1001 aaPredicted RBP13.11□□□□□ -0.31
SND1-203ENST00000463020 CYBRD1Q53TN4 286 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
SND1-203ENST00000463020 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 CITED1Q99966 193 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 MARCH7Q9H992 704 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 C1RLQ9NZP8 487 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 OR5V1Q9UGF6 321 aa13.11□□□□□ -0.31
SND1-203ENST00000463020 IGHV2-70DA0A0C4DH43 119 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 CENPBD1B2RD01 187 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 CYB5R3P00387 301 aaPredicted RBP13.1□□□□□ -0.31
SND1-203ENST00000463020 IFNA14P01570 189 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 FABP3P05413 133 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 SELEP16581 610 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 MAGEA2P43356 314 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
SND1-203ENST00000463020 CD47Q08722 323 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 OCLNQ16625 522 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 FAM201AQ5SY85 155 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 RUSC1-AS1Q66K80 236 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 TBPL2Q6SJ96 375 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 FOXL2NBQ6ZUU3 175 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 CBLL1Q75N03 491 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 SLC30A8Q8IWU4 369 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 C8orf59Q8N0T1 100 aaPredicted RBP13.1□□□□□ -0.31
SND1-203ENST00000463020 SLC7A6Q92536 515 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 MPP4Q96JB8 637 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 EVA1AQ9H8M9 152 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 SMURF2Q9HAU4 748 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms