RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SLC27A4Q6P1M0 643 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 LRRC28Q86X40 367 aaPredicted RBP15.97■□□□□ 0.15
VARS-220ENST00000461874 SPICQ8N5J4 248 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 OR9Q2Q8NGE9 314 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 OR4C15Q8NGM1 316 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 OR2AJ1Q8NGZ0 328 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 OR13G1Q8NGZ3 307 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 ST7LQ8TDW4 575 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 NSL1Q96IY1 281 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 ZNF582Q96NG8 517 aaPredicted RBP15.97■□□□□ 0.15
VARS-220ENST00000461874 SIGLEC11Q96RL6 698 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 CCT8L2Q96SF2 557 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 PITX2Q99697 317 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 C1QTNF5Q9BXJ0 243 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 MRPL22Q9NWU5 206 aaKnown RBP15.97■□□□□ 0.15
VARS-220ENST00000461874 IL20Q9NYY1 176 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 TCRBV5S2A0A599 114 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 BHLHE40O14503 412 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 GASTP01350 101 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 HLA-DQA2P01906 255 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 ACSM4P0C7M7 580 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 EPHA1P21709 976 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 ZFP36P26651 326 aaKnown RBP15.96■□□□□ 0.15
VARS-220ENST00000461874 BTG1P62324 171 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 ZMYND11Q15326 602 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 C1QL2Q7Z5L3 287 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 ARHGAP24Q8N264 748 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 OR52L1Q8NGH7 329 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 ATF6BQ99941 703 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 C7orf69Q9H7B7 122 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 GCM1Q9NP62 436 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 PNRC2Q9NPJ4 139 aaKnown RBP15.96■□□□□ 0.15
VARS-220ENST00000461874 PCDHB10Q9UN67 800 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 TANC2Q9HCD6 1990 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 DYSFO75923 2080 aa15.96■□□□□ 0.15
VARS-220ENST00000461874 ARHGAP32A7KAX9 2087 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 PPIAL4EA0A075B759 164 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 PPIAL4CA0A0B4J2A2 164 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 IQCF6A8MYZ5 107 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 PPIAL4DF5H284 164 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 F5H5K5 113 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 TMEM178BH3BS89 294 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 FOXH1O75593 365 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 CCNB2O95067 398 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 PPIAL4FP0DN26 164 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 MMP16P51512 607 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 TRAP1Q12931 704 aaKnown RBP15.95■□□□□ 0.14
VARS-220ENST00000461874 ZNF362Q5T0B9 420 aaPredicted RBP15.95■□□□□ 0.14
VARS-220ENST00000461874 LCN8Q6JVE9 175 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 RASSF6Q6ZTQ3 369 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 DHFR2Q86XF0 187 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 KLHL36Q8N4N3 616 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 SEMA6DQ8NFY4 1073 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 OR10AD1Q8NGE0 317 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 ZNF418Q8TF45 676 aaPredicted RBP15.95■□□□□ 0.14
VARS-220ENST00000461874 ZFAND2BQ8WV99 257 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 MEGF10Q96KG7 1140 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 SLC30A2Q9BRI3 323 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 PLA2G12AQ9BZM1 189 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 MUC13Q9H3R2 512 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 MAGIXQ9H6Y5 334 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 WDR76Q9H967 626 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 PATZ1Q9HBE1 687 aaKnown RBP15.95■□□□□ 0.14
VARS-220ENST00000461874 OPN4Q9UHM6 478 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 KCNG2Q9UJ96 466 aa15.95■□□□□ 0.14
VARS-220ENST00000461874 H0YL77 283 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 IFNL4K9M1U5 179 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 ZNF823P16415 610 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 SELEP16581 610 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 ADRA2CP18825 462 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 PYCR1P32322 319 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 SRP9P49458 86 aaKnown RBP15.94■□□□□ 0.14
VARS-220ENST00000461874 TRIM25Q14258 630 aaKnown RBP15.94■□□□□ 0.14
VARS-220ENST00000461874 NAA40Q86UY6 237 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.94■□□□□ 0.14
VARS-220ENST00000461874 CYB561A3Q8NBI2 242 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 BHLHE23Q8NDY6 225 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 OR8D4Q8NGM9 314 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 OR2T4Q8NH00 348 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 NANPQ8TBE9 248 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 ZNRF4Q8WWF5 429 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 MAP6Q96JE9 813 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 HCAR1Q9BXC0 346 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 TMEM100Q9NV29 134 aa15.94■□□□□ 0.14
VARS-220ENST00000461874 POLR3KQ9Y2Y1 108 aaPredicted RBP15.94■□□□□ 0.14
VARS-220ENST00000461874 A0A1B0GWJ7 208 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 MLNRO43193 412 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 LCATP04180 440 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 MDH2P40926 338 aaKnown RBP15.93■□□□□ 0.14
VARS-220ENST00000461874 SLC6A9P48067 706 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 MS4A2Q01362 244 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 PPP1R8Q12972 351 aaKnown RBP15.93■□□□□ 0.14
VARS-220ENST00000461874 GK2Q14410 553 aaPredicted RBP15.93■□□□□ 0.14
VARS-220ENST00000461874 USP43Q70EL4 1123 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 LNX2Q8N448 690 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 AQP11Q8NBQ7 271 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 PROKR2Q8NFJ6 384 aa15.93■□□□□ 0.14
VARS-220ENST00000461874 TVP23AA6NH52 213 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 F5H0A9 414 aaPredicted RBP15.92■□□□□ 0.14
VARS-220ENST00000461874 F5H5P2 479 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms