RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 COL4A6Q14031 1691 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 DDX60LQ5H9U9 1706 aaKnown RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 F6UB75 175 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 CDC7O00311 574 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 RAB29O14966 203 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 PPP1R2P9O14990 202 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 KMOO15229 486 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 RNF13O43567 381 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 AIFM1O95831 613 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 GNAO1P09471 354 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 TLX1NBP0CAT3 122 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 AK4P27144 223 aaPredicted RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 TNNT2P45379 298 aaPredicted RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 HERVK_113P61574 105 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 NUTF2P61970 127 aaKnown RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 YWHAGP61981 247 aaKnown RBP eCLIP2.06□□□□□ -2.08
RFC4-211ENST00000460408 ACTA2P62736 377 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 ACTG2P63267 376 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 ACTC1P68032 377 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 ACTA1P68133 377 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 CHRNA6Q15825 494 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 TFDP3Q5H9I0 405 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 LRRC66Q68CR7 880 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 SLC8B1Q6J4K2 584 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 METAP1DQ6UB28 335 aaPredicted RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 CERS6Q6ZMG9 384 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 ZNF493Q6ZR52 646 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 CCDC73Q6ZRK6 1079 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 CNPY4Q8N129 248 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 EID2Q8N6I1 236 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 CXorf40AQ8TE69 158 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 OPTNQ96CV9 577 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 PKNOX2Q96KN3 472 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 PLIN2Q99541 437 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 SLC40A1Q9NP59 571 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 PSG8Q9UQ74 426 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 MRPS18BQ9Y676 258 aaKnown RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 MN1Q10571 1320 aaPredicted RBP2.06□□□□□ -2.08
RFC4-211ENST00000460408 EVC2Q86UK5 1308 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 A0A1W2PP64 1363 aa2.06□□□□□ -2.08
RFC4-211ENST00000460408 CEP295Q9C0D2 2601 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ASPMQ8IZT6 3477 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 MYO15AQ9UKN7 3530 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 IGHV3-66A0A0C4DH42 116 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ZNF816-ZNF321PA0A0X1KG74 233 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 CLOCKO15516 846 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ANGPTL7O43827 346 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 CHST1O43916 411 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ERLIN1O75477 346 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 CLIC3O95833 236 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 TROVE2P10155 538 aaKnown RBP eCLIP2.05□□□□□ -2.08
RFC4-211ENST00000460408 ZNF823P16415 610 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ZNF32P17041 273 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 FOXN2P32314 431 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 NAA10P41227 235 aaPredicted RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 UBE2AP49459 152 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 TMED10P49755 219 aaKnown RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 ZNF138P52744 262 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 SLC25A11Q02978 314 aaKnown RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 MXD1Q05195 221 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 LRRC63Q05C16 580 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 MRPL23Q16540 153 aaKnown RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 POU2AF1Q16633 256 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 KCTD19Q17RG1 926 aaPredicted RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ZNF691Q5VV52 312 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 RAET1LQ5VY80 246 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ANKRD22Q5VYY1 191 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 OR52W1Q6IF63 320 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 TEX43Q6ZNM6 134 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 SAXO1Q8IYX7 474 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 LIX1Q8N485 282 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 FAM86B1Q8N7N1 296 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 OR10G4Q8NGN3 311 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 OR4S2Q8NH73 311 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 STARD8Q92502 1023 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 SLC38A4Q969I6 547 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 EXOSC8Q96B26 276 aaKnown RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 FAM3DQ96BQ1 224 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 CCDC126Q96EE4 140 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 SLC29A1Q99808 456 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 CENPKQ9BS16 269 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 PLA2G2FQ9BZM2 168 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 IFI27L2Q9H2X8 130 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 RPP21Q9H633 154 aaKnown RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 UBE2ZQ9H832 354 aaPredicted RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 ANKRA2Q9H9E1 313 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 DCAF16Q9NXF7 216 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 ZNF629Q9UEG4 869 aaPredicted RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 PSG11Q9UQ72 335 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 DNAH12Q6ZR08 3092 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 A0A0G2JMZ2 1700 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 PRRC2BQ5JSZ5 2229 aaKnown RBP2.05□□□□□ -2.08
RFC4-211ENST00000460408 CREBBPQ92793 2442 aa2.05□□□□□ -2.08
RFC4-211ENST00000460408 TRBV11-1A0A0K0K1C0 115 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 GLYATL1P3A0A0U1RQE8 302 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 A0A1B0GVX0 72 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 CIB4A0PJX0 185 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 RSPH10B2B2RC85 870 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 C9JVG2 144 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms