RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SRP9P49458 86 aaKnown RBP19.15■□□□□ 0.66
PTPN4-207ENST00000460162 SEC61A1P61619 476 aaKnown RBP19.15■□□□□ 0.66
PTPN4-207ENST00000460162 KRTAP27-1Q3LI81 207 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 SLC36A3Q495N2 470 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 ESCO2Q56NI9 601 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 ARMCX4Q5H9R4 360 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 SLC18B1Q6NT16 456 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 CORO6Q6QEF8 472 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 ZNF620Q6ZNG0 422 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 COLCA1Q6ZS62 124 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 OR4K13Q8NH42 304 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 MEGF10Q96KG7 1140 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 SLC30A2Q9BRI3 323 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 SRA1Q9HD15 236 aaKnown RBP19.15■□□□□ 0.66
PTPN4-207ENST00000460162 RPRD1BQ9NQG5 326 aaKnown RBP19.15■□□□□ 0.66
PTPN4-207ENST00000460162 CD300AQ9UGN4 299 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 TMCC3Q9ULS5 477 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 LRCH1Q9Y2L9 728 aa19.15■□□□□ 0.66
PTPN4-207ENST00000460162 TMEM89A2RUT3 159 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 SELEP16581 610 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 ECH1Q13011 328 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 ZNF154Q13106 437 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 CFAP77Q6ZQR2 320 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 CPLX4Q7Z7G2 160 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 GCDHQ92947 438 aaPredicted RBP19.14■□□□□ 0.65
PTPN4-207ENST00000460162 DVL3Q92997 716 aaPredicted RBP19.14■□□□□ 0.65
PTPN4-207ENST00000460162 ATF6BQ99941 703 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 HCAR1Q9BXC0 346 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 C1QTNF5Q9BXJ0 243 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 NTN4Q9HB63 628 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 IL1RAPQ9NPH3 570 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 MMP26Q9NRE1 261 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 OR5V1Q9UGF6 321 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 INSIG2Q9Y5U4 225 aa19.14■□□□□ 0.65
PTPN4-207ENST00000460162 A0A1B0GWJ7 208 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 CEACAM18A8MTB9 384 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 MLNRO43193 412 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 RBMXP38159 391 aaKnown RBP19.13■□□□□ 0.65
PTPN4-207ENST00000460162 TSPAN31Q12999 210 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 ZNF181Q2M3W8 571 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 SPATS1Q496A3 300 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 LINC00346Q8IVM7 164 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 BHLHE23Q8NDY6 225 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 SDR9C7Q8NEX9 313 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 OR2AJ1Q8NGZ0 328 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 PITX2Q99697 317 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 MRI1Q9BV20 369 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 NDE1Q9NXR1 346 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 TAGLN3Q9UI15 199 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 KCNG2Q9UJ96 466 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 AUP1Q9Y679 476 aa19.13■□□□□ 0.65
PTPN4-207ENST00000460162 TRAPPC2LH3BP13 241 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 FSTL3O95633 263 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 ACSM4P0C7M7 580 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 TUSC1Q2TAM9 212 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 RPL13AP3Q6NVV1 102 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 PGBD2Q6P3X8 592 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 ZDHHC22Q8N966 263 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 OR52L1Q8NGH7 329 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 ZNF420Q8TAQ5 688 aaPredicted RBP19.12■□□□□ 0.65
PTPN4-207ENST00000460162 GNPDA2Q8TDQ7 276 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 ZMYND19Q96E35 227 aaPredicted RBP19.12■□□□□ 0.65
PTPN4-207ENST00000460162 CDADC1Q9BWV3 514 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 FN3KQ9H479 309 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 ESM1Q9NQ30 184 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 CYB5R1Q9UHQ9 305 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 NUP50Q9UKX7 468 aa19.12■□□□□ 0.65
PTPN4-207ENST00000460162 OR6C68A6NDL8 312 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 LRRC30A6NM36 301 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 HLA-DQA2P01906 255 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 RPS2P15880 293 aaKnown RBP19.11■□□□□ 0.65
PTPN4-207ENST00000460162 MSX2P35548 267 aaPredicted RBP19.11■□□□□ 0.65
PTPN4-207ENST00000460162 GGT2P36268 569 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 TRAP1Q12931 704 aaKnown RBP19.11■□□□□ 0.65
PTPN4-207ENST00000460162 RSPO1Q2MKA7 263 aaPredicted RBP19.11■□□□□ 0.65
PTPN4-207ENST00000460162 C16orf89Q6UX73 402 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 ZDHHC21Q8IVQ6 265 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 C1orf87Q8N0U7 546 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 OR52E2Q8NGJ4 325 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 C22orf15Q8WYQ4 148 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 CDRT15Q96T59 188 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 SSBP3Q9BWW4 388 aaPredicted RBP19.11■□□□□ 0.65
PTPN4-207ENST00000460162 WDR76Q9H967 626 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 PNRC2Q9NPJ4 139 aaKnown RBP19.11■□□□□ 0.65
PTPN4-207ENST00000460162 CDH10Q9Y6N8 788 aa19.11■□□□□ 0.65
PTPN4-207ENST00000460162 F5H5K5 113 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 F5H5P2 479 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 H0YL77 283 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 KRT36O76013 467 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 CYB5R3P00387 301 aaPredicted RBP19.1■□□□□ 0.65
PTPN4-207ENST00000460162 GATA4P43694 442 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 UBA52P62987 128 aaKnown RBP19.1■□□□□ 0.65
PTPN4-207ENST00000460162 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPN4-207ENST00000460162 MALLQ13021 153 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 GK2Q14410 553 aaPredicted RBP19.1■□□□□ 0.65
PTPN4-207ENST00000460162 RBMS3Q6XE24 437 aaKnown RBP19.1■□□□□ 0.65
PTPN4-207ENST00000460162 CELF2-AS1Q8N7Q2 184 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 DDX28Q9NUL7 540 aaKnown RBP19.1■□□□□ 0.65
PTPN4-207ENST00000460162 TMEM100Q9NV29 134 aa19.1■□□□□ 0.65
PTPN4-207ENST00000460162 MRPL22Q9NWU5 206 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms