RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ZNF283Q8N7M2 679 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 SDR9C7Q8NEX9 313 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 C22orf15Q8WYQ4 148 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 PITX2Q99697 317 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 FN3KQ9H479 309 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 B9D1Q9UPM9 204 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 LHFPL6Q9Y693 200 aa13.27□□□□□ -0.29
CHCHD3-204ENST00000457942 IGLV1-36A0A0B4J1U3 117 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 IGHV3-64DA0A0J9YX35 117 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 HSD17B1P14061 328 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 HIST1H1CP16403 213 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 FPR2P25090 351 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 ZFP36P26651 326 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 SRP9P49458 86 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 MMP16P51512 607 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 ZMYND11Q15326 602 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC36A3Q495N2 470 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 TMEM155Q4W5P6 130 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 ESCO2Q56NI9 601 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 FBXW12Q6X9E4 464 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 DEFB107AQ8IZN7 70 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 MUC20Q8N307 709 aaPredicted RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 OR8G5Q8NG78 346 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 OR52L1Q8NGH7 329 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 OR13G1Q8NGZ3 307 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 CDRT15Q96T59 188 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 FUZQ9BT04 418 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 HCAR1Q9BXC0 346 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 WDR76Q9H967 626 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 PATZ1Q9HBE1 687 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 ESM1Q9NQ30 184 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 OR5V1Q9UGF6 321 aa13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 PRKDCP78527 4128 aaKnown RBP13.26□□□□□ -0.29
CHCHD3-204ENST00000457942 F5H5K5 113 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 SEMG1P04279 462 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 SEC61A1P61619 476 aaKnown RBP13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 DBPQ10586 325 aaPredicted RBP13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 COX10Q12887 443 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 CLEC12AQ5QGZ9 265 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC35F1Q5T1Q4 408 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 C16orf89Q6UX73 402 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 OR6V1Q8N148 313 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC26A10Q8NG04 563 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF420Q8TAQ5 688 aaPredicted RBP13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 BCAS4Q8TDM0 211 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 GNPDA2Q8TDQ7 276 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 MEGF10Q96KG7 1140 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 MRI1Q9BV20 369 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 GCM1Q9NP62 436 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 NDE1Q9NXR1 346 aa13.25□□□□□ -0.29
CHCHD3-204ENST00000457942 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 TMEM178BH3BS89 294 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 IFNL4K9M1U5 179 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 ARPC3O15145 178 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF205O95201 554 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 CYB5R3P00387 301 aaPredicted RBP13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 LCATP04180 440 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 RPS2P15880 293 aaKnown RBP13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 SELEP16581 610 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 PRSS12P56730 875 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 MALLQ13021 153 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC18B1Q6NT16 456 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF620Q6ZNG0 422 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 CFAP77Q6ZQR2 320 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 MOGAT3Q86VF5 341 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 LRRC28Q86X40 367 aaPredicted RBP13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 ZDHHC21Q8IVQ6 265 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 OR52E2Q8NGJ4 325 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 POP5Q969H6 163 aaKnown RBP13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 ATF6BQ99941 703 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 MMP26Q9NRE1 261 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 OPN4Q9UHM6 478 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 AUP1Q9Y679 476 aa13.24□□□□□ -0.29
CHCHD3-204ENST00000457942 PPIAL4EA0A075B759 164 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 PPIAL4CA0A0B4J2A2 164 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 OR6C68A6NDL8 312 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 CEACAM18A8MTB9 384 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 B2RBV5 119 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 PPIAL4DF5H284 164 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 F5H5P2 479 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 H0YL77 283 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 PPIAL4FP0DN26 164 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 IRF2P14316 349 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF823P16415 610 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC6A9P48067 706 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 TRAP1Q12931 704 aaKnown RBP13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 TSPAN31Q12999 210 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 ECH1Q13011 328 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF154Q13106 437 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 DEFB108BQ8NET1 73 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms