RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 AMDHD2Q9Y303 409 aa4.76□□□□□ -1.65
VPS41-209ENST00000457055 CEPT1Q9Y6K0 416 aa4.76□□□□□ -1.65
VPS41-209ENST00000457055 ABCC12Q96J65 1359 aa4.76□□□□□ -1.65
VPS41-209ENST00000457055 HEG1Q9ULI3 1381 aa4.76□□□□□ -1.65
VPS41-209ENST00000457055 LAMB1P07942 1786 aa4.76□□□□□ -1.65
VPS41-209ENST00000457055 ANKUB1A6NFN9 424 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 PRSS46E5RG02 174 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 M0QZQ0 153 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 FAAHO00519 579 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 EPHB6O15197 1021 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CHST1O43916 411 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 PROP1O75360 226 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 ANXA9O76027 345 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 NDUFA7O95182 113 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 VENTXO95231 258 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 RAB36O95755 333 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 MMP1P03956 469 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 RLN2P04090 185 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 HIST1H2AGP0C0S8 130 aaPredicted RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 SP9P0CG40 484 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 KITLGP21583 273 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 PRDX3P30048 256 aaKnown RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 GGT2P36268 569 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CX3CR1P49238 355 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 GEMP55040 296 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CDH12P55289 794 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 TCTAP57738 103 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 NCALDP61601 193 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 STXBP1P61764 594 aaKnown RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 PPP3R1P63098 170 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 GNG3P63215 75 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 ZXDBP98169 803 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 GTF2H2Q13888 395 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CEACAM7Q14002 265 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CCNIQ14094 377 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 MAD2L1BPQ15013 274 aaPredicted RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 SURF2Q15527 256 aaPredicted RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 NSDHLQ15738 373 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 MS4A18Q3C1V0 323 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 ZFP69Q49AA0 526 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 ZNF585BQ52M93 769 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CARD16Q5EG05 197 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 LY6G6FQ5SQ64 297 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 GPRC6AQ5T6X5 926 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 TMEM268Q5VZI3 342 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 ZNF776Q68DI1 518 aaPredicted RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 PRR27Q6MZM9 219 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 GTF2H2CQ6P1K8 395 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 C16orf89Q6UX73 402 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 BAIAP2L2Q6UXY1 529 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 AMIGO1Q86WK6 493 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 C8orf59Q8N0T1 100 aaPredicted RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 LRRC52Q8N7C0 313 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 TMEM217Q8N7C4 229 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 OR5AU1Q8NGC0 362 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 OR52I1Q8NGK6 324 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 OR13G1Q8NGZ3 307 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 OR1F12Q8NHA8 337 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 BAALCQ8WXS3 180 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 HIST1H2ACQ93077 130 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 RPEQ96AT9 228 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 SMARCD1Q96GM5 515 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 KCTD7Q96MP8 289 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CPXM1Q96SM3 734 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 BTBD10Q9BSF8 475 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 NAA50Q9GZZ1 169 aaKnown RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 SDCBP2Q9H190 292 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 NIPAL2Q9H841 368 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 DNAJC4Q9NNZ3 241 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 ISYNA1Q9NPH2 558 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 IL17RBQ9NRM6 502 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 DUS2Q9NX74 493 aaKnown RBP4.75□□□□□ -1.65
VPS41-209ENST00000457055 JKAMPQ9P055 326 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 CD84Q9UIB8 345 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 SLC45A2Q9UMX9 530 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 DHDHQ9UQ10 334 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 TIMM10BQ9Y5J6 103 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 PEX16Q9Y5Y5 336 aa4.75□□□□□ -1.65
VPS41-209ENST00000457055 WDR81Q562E7 1941 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 TGIF2-C20orf24A0A0A6YYL0 155 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 DNAJC9-AS1A6NH13 148 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 ARL5CA6NH57 179 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 SLC22A20A6NK97 555 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 C3orf70A6NLC5 250 aaPredicted RBP4.74□□□□□ -1.65
VPS41-209ENST00000457055 C2CD4BA6NLJ0 364 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 EIF4E1BA6NMX2 242 aaKnown RBP4.74□□□□□ -1.65
VPS41-209ENST00000457055 H3BSA7 217 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 K7EN84 100 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 SIRPB1O00241 398 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 SLC1A7O00341 560 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 FGF16O43320 207 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 SNAP91O60641 907 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 SLC16A7O60669 478 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 LYPLA1O75608 230 aaPredicted RBP4.74□□□□□ -1.65
VPS41-209ENST00000457055 UGT2B17O75795 530 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 HPP00738 406 aa4.74□□□□□ -1.65
VPS41-209ENST00000457055 TIMP1P01033 207 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms