RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 M0R135 149 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 OGG1O15527 345 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 GOSR1O95249 250 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 ACSM4P0C7M7 580 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 CECR9P0C854 216 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TUBG1P23258 451 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 APEX1P27695 318 aaKnown RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 APLNRP35414 380 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 RGS6P49758 472 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 GDI2P50395 445 aaKnown RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 IDH3GP51553 393 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 MLLT11Q13015 90 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 GPR50Q13585 617 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TAF13Q15543 124 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TBC1D28Q2M2D7 210 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF829Q3KNS6 432 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 SYT6Q5T7P8 510 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 RPL22L1Q6P5R6 122 aaKnown RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TMEM108Q6UXF1 575 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 MYPOPQ86VE0 399 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 YIPF7Q8N8F6 280 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 FAM222BQ8WU58 562 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF799Q96GE5 643 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 MS4A3Q96HJ5 214 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 COG8Q96MW5 612 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 OR5M11Q96RB7 305 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 SPOCK3Q9BQ16 436 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 C1QTNF5Q9BXJ0 243 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 MRPS26Q9BYN8 205 aaKnown RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TRIM36Q9NQ86 728 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 G6PC2Q9NQR9 355 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TUBG2Q9NRH3 451 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 ACOXLQ9NUZ1 547 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TBCCD1Q9NVR7 557 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 NUFIP1Q9UHK0 495 aaKnown RBP9.75□□□□□ -0.85
TRAF4-206ENST00000454852 GNG8Q9UK08 70 aa9.75□□□□□ -0.85
TRAF4-206ENST00000454852 TMEM269A0A1B0GVZ9 245 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 PYCARD-AS1I3L0S3 204 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 C19orf84I3L1E1 186 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 J3QLW9 94 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 MAGEB4O15481 346 aaPredicted RBP9.74□□□□□ -0.85
TRAF4-206ENST00000454852 PNPP00491 289 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 LALBAP00709 142 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 IGLV3-1P01715 115 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 CELA3BP08861 270 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 RPSAP08865 295 aaKnown RBP9.74□□□□□ -0.85
TRAF4-206ENST00000454852 DBHP09172 617 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF19P17023 458 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 CD53P19397 219 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 CD40P25942 277 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 HSD11B1P28845 292 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 MAP2K4P45985 399 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 CX3CR1P49238 355 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 GBX2P52951 348 aaPredicted RBP9.74□□□□□ -0.85
TRAF4-206ENST00000454852 NAAAQ02083 359 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 HGFACQ04756 655 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 TPBGQ13641 420 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 DOC2BQ14184 412 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 DAZAP2Q15038 168 aaPredicted RBP9.74□□□□□ -0.85
TRAF4-206ENST00000454852 NCMAPQ5T1S8 102 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF544Q6NX49 715 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 SPATC1Q76KD6 591 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 CATSPERDQ86XM0 798 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 OR52H1Q8NGJ2 320 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 GATAD2BQ8WXI9 593 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 SLC7A6Q92536 515 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 MUL1Q969V5 352 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 C4orf45Q96LM5 186 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 VCX3AQ9NNX9 186 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 ST6GALNAC2Q9UJ37 374 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
TRAF4-206ENST00000454852 ANKHD1Q8IWZ3 2542 aaKnown RBP9.74□□□□□ -0.85
TRAF4-206ENST00000454852 SPTBN1Q01082 2364 aaKnown RBP9.73□□□□□ -0.85
TRAF4-206ENST00000454852 IGHV2OR16-5A0A0B4J2B6 119 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 A0A0U1RQV5 110 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 C5orf49A4QMS7 147 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 DPRXA6NFQ7 191 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 E9PI62 339 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 F5H5K5 113 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 PSMD9O00233 223 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 PLPP2O43688 288 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 ISG15P05161 165 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 LCKP06239 509 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 LOXP28300 417 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-206ENST00000454852 WNT5AP41221 380 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 KIR2DL3P43628 341 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF83P51522 516 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 PRKXP51817 358 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 ZNF121P58317 390 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-206ENST00000454852 NANOS3P60323 173 aaKnown RBP9.73□□□□□ -0.85
TRAF4-206ENST00000454852 GALK2Q01415 458 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 ALKBH1Q13686 389 aaKnown RBP9.73□□□□□ -0.85
TRAF4-206ENST00000454852 CDK5R1Q15078 307 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 MED22Q15528 200 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 BEX5Q5H9J7 111 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 DMKNQ6E0U4 476 aaPredicted RBP9.73□□□□□ -0.85
TRAF4-206ENST00000454852 ARL9Q6T311 187 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 UNQ6126/PRO20091Q6UXV3 157 aa9.73□□□□□ -0.85
TRAF4-206ENST00000454852 Q6ZSR3 168 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms