RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 OR10A4Q9H209 315 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 C21orf140B9A014 251 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 RBBP9O75884 186 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 GUCA2AQ02747 115 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 GALNTL5Q7Z4T8 443 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 EGFL6Q8IUX8 553 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 DUSP18Q8NEJ0 188 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 OR2M2Q96R28 347 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 LOC100289279A0A1B0GTE1 492 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 MEGF11A6BM72 1044 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 SSNA1O43805 119 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 PATE4P0C8F1 98 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 SLC6A1P30531 599 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 DCTDP32321 178 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 MMP16P51512 607 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 RAC3P60763 192 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
CLK3-203ENST00000454830 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 VASH2Q86V25 355 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 ACBD4Q8NC06 268 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 ZNF837Q96EG3 531 aaPredicted RBP12.09□□□□□ -0.47
CLK3-203ENST00000454830 SOX7Q9BT81 388 aa12.09□□□□□ -0.47
CLK3-203ENST00000454830 GABARAPH6UMI1 98 aa12.08□□□□□ -0.47
CLK3-203ENST00000454830 ACOT7O00154 380 aa12.08□□□□□ -0.47
CLK3-203ENST00000454830 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.47
CLK3-203ENST00000454830 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.47
CLK3-203ENST00000454830 SUCLG1P53597 346 aaKnown RBP12.08□□□□□ -0.47
CLK3-203ENST00000454830 OR2V1Q8NHB1 315 aa12.08□□□□□ -0.47
CLK3-203ENST00000454830 ELL3Q9HB65 397 aaPredicted RBP12.08□□□□□ -0.47
CLK3-203ENST00000454830 CRLF2Q9HC73 371 aa12.08□□□□□ -0.47
CLK3-203ENST00000454830 FAM206AQ9NX38 181 aa12.08□□□□□ -0.47
CLK3-203ENST00000454830 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.47
CLK3-203ENST00000454830 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 CELA3AP09093 270 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 H2AFB2P0C5Z0 115 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 CNR1P21554 472 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 BDKRB2P30411 391 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
CLK3-203ENST00000454830 NAA40Q86UY6 237 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 OR5D14Q8NGL3 314 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 ABHD3Q8WU67 409 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 KCNE4Q8WWG9 221 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 CREB3L1Q96BA8 519 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 ADAT3Q96EY9 351 aaPredicted RBP12.08□□□□□ -0.48
CLK3-203ENST00000454830 SH2D2AQ9NP31 389 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 ING3Q9NXR8 418 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 ZNF17P17021 662 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 RCVRNP35243 200 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 PTH2RP49190 550 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 OR8B12Q8NGG6 310 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 AKAP1Q92667 903 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLK3-203ENST00000454830 MARVELD1Q9BSK0 173 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 SLC6A15Q9H2J7 730 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 NPAP1Q9NZP6 1156 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 FLVCR2Q9UPI3 526 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 CEP250Q9BV73 2442 aa12.08□□□□□ -0.48
CLK3-203ENST00000454830 TMEM272A0A1B0GTI8 110 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 GMDSO60547 372 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 RLN1P04808 185 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 CSN2P05814 226 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 GTF2F2P13984 249 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 B4GALT1P15291 398 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 RAB3AP20336 220 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 ELMOD2Q8IZ81 293 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 UXS1Q8NBZ7 420 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 GJC3Q8NFK1 279 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 NELFAQ9H3P2 528 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 ZNF275Q9NSD4 429 aaPredicted RBP12.07□□□□□ -0.48
CLK3-203ENST00000454830 SMLR1H3BR10 107 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 ATP6V1G1O75348 118 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 CTAG2O75638 210 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 MAGEA5P43359 124 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 PRSS12P56730 875 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 H3F3AP84243 136 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 PDSS1Q5T2R2 415 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 AWAT2Q6E213 333 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 TMEM81Q6P7N7 255 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 OR2M7Q8NG81 312 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 OR52N4Q8NGI2 321 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 OR6M1Q8NGM8 313 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 OR1J2Q8NGS2 313 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 ZC3HAV1LQ96H79 300 aaKnown RBP12.07□□□□□ -0.48
CLK3-203ENST00000454830 ST6GAL2Q96JF0 529 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 FAM173AQ9BQD7 235 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 GGT3PA6NGU5 568 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 DBHP09172 617 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 PRSS3P35030 304 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 PCK2Q16822 640 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 HACD4Q5VWC8 232 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 SLC25A25Q6KCM7 469 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 SULF2Q8IWU5 870 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 OR5D18Q8NGL1 313 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 DVL3Q92997 716 aaPredicted RBP12.07□□□□□ -0.48
CLK3-203ENST00000454830 FER1L6-AS2Q96M78 137 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 HRASLSQ9HDD0 168 aa12.07□□□□□ -0.48
CLK3-203ENST00000454830 FANCFQ9NPI8 374 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms