RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PRSS37A4D1T9 235 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MEGF11A6BM72 1044 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GMNCA6NCL1 334 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC22A31A6NKX4 558 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MRASO14807 208 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PHYHO14832 338 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SURF4O15260 269 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ENSAO43768 121 aaKnown RBP4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NDUFA7O95182 113 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF682O95780 498 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GYPAP02724 150 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NR2C1P13056 603 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SELLP14151 372 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MMP9P14780 707 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FPR3P25089 353 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LIPAP38571 399 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PROK1P58294 105 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GMFBP60983 142 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MAB21L1Q13394 359 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 AQP6Q13520 282 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR8B8Q15620 311 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TAF9Q16594 264 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 INTS11Q5TA45 600 aaKnown RBP4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LYPD4Q6UWN0 246 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LRRN1Q6UXK5 716 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 UNQ6126/PRO20091Q6UXV3 157 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF730Q6ZMV8 503 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF841Q6ZN19 808 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 Q6ZPA2 131 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM122BQ7Z309 247 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZER1Q7Z7L7 766 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CALHM3Q86XJ0 350 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OFCC1Q8IZS5 231 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PIP4P2Q8N4L2 257 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SCCPDHQ8NBX0 429 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR8G5Q8NG78 346 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR2AE1Q8NHA4 323 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C10orf82Q8WW14 230 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DYDC1Q8WWB3 177 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ST8SIA4Q92187 359 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HAVCR1Q96D42 359 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SEH1LQ96EE3 360 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RBP7Q96R05 134 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ECSITQ9BQ95 431 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC30A2Q9BRI3 323 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ADAT1Q9BUB4 502 aaKnown RBP4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 EVA1AQ9H8M9 152 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TCF7L1Q9HCS4 588 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SIRT7Q9NRC8 400 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TBCCD1Q9NVR7 557 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ARMCX1Q9P291 453 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 STX18Q9P2W9 335 aaKnown RBP4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ONECUT1Q9UBC0 465 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RPS6KA6Q9UK32 745 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MMP24Q9Y5R2 645 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 V9GYQ6 96 aa4.96□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HUWE1Q7Z6Z7 4374 aaKnown RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 A0A087WUU8 490 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IGHV1-69DA0A0B4J2H0 117 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TRBV4-1A0A0J9YWV2 114 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KIR2DS1A0A191URI9 304 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 hCG_1807616A0A1W2PRN6 198 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 A6NIZ1 184 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 A6NLC8 198 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LRRC30A6NM36 301 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IQCF6A8MYZ5 107 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM220BPB1ANY3 271 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF879B4DU55 563 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 F5H5K5 113 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 XKRYO14609 159 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ADAM20O43506 726 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TOX4O94842 621 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DIRAS1O95057 198 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PPP1R3DO95685 299 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IGHV1-69P01742 117 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CD14P08571 375 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC2A1P11166 492 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RAC2P15153 192 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CA6P23280 308 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GUCA1AP43080 201 aaPredicted RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SRP9P49458 86 aaKnown RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FXYD6P3P58550 94 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RAP1BP61224 184 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ARF6P62330 175 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RAP1AP62834 184 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CSNK2BP67870 215 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GK2Q14410 553 aaPredicted RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SNAI3Q3KNW1 292 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FGD3Q5JSP0 725 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 BEND6Q5SZJ8 279 aaPredicted RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM205BPQ63HN1 556 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DHRS7BQ6IAN0 325 aaPredicted RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FBXW12Q6X9E4 464 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 Q6YL49 198 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF620Q6ZNG0 422 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DCDC5Q6ZRR9 648 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 Q6ZSV7 163 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CCDC80Q76M96 950 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 VMO1Q7Z5L0 202 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms