RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 APOBEC3DQ96AK3 386 aaPredicted RBP23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 COG8Q96MW5 612 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 YIPF3Q9GZM5 350 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 NKX1-2Q9UD57 310 aaPredicted RBP23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 GMPPBQ9Y5P6 360 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 MAP1AP78559 2803 aaPredicted RBP23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 LOC100130705A0A1B0GUX0 176 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 SLC16A6O15403 523 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 LYNP07948 512 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 GCH1P30793 250 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 SNRPGP62308 76 aaKnown RBP23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 TMEM255AQ5JRV8 349 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 Q5PR19 223 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 SLC25A30Q5SVS4 291 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 ZNF582Q96NG8 517 aaPredicted RBP23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 KCNJ15Q99712 375 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 COPS4Q9BT78 406 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 SLCO1C1Q9NYB5 712 aa23.97■■□□□ 1.43
SMARCC1-203ENST00000454240 M0R135 149 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 M0R233 179 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 ADRA2AP08913 450 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 MRPL3P09001 348 aaKnown RBP23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 ALOX5APP20292 161 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 HTR1FP30939 366 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 OR5L1Q8NGL2 311 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 THEM6Q8WUY1 208 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 ZNF799Q96GE5 643 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 SORCS2Q96PQ0 1159 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 VRK1Q99986 396 aaPredicted RBP23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 BARX1Q9HBU1 254 aaPredicted RBP23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 DYNLRB1Q9NP97 96 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 TAAR3PQ9P1P4 343 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 WARS2Q9UGM6 360 aaKnown RBP23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 KLHDC2Q9Y2U9 406 aa23.96■■□□□ 1.43
SMARCC1-203ENST00000454240 A0A1W2PPW3 197 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 ALDH3B1P43353 468 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 SLC15A1P46059 708 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 HCCSP53701 268 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 GRB2P62993 217 aaKnown RBP23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 MAD2L1BPQ15013 274 aaPredicted RBP23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 TAF13Q15543 124 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 DRAM2Q6UX65 266 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 SPATC1Q76KD6 591 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 ZCCHC24Q8N2G6 241 aaKnown RBP23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 WFDC11Q8NEX6 87 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 CNN2Q99439 309 aaKnown RBP23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 MS4A5Q9H3V2 200 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 ADGRL4Q9HBW9 690 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 DNAJC27Q9NZQ0 273 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 LAMP5Q9UJQ1 280 aa23.95■■□□□ 1.42
SMARCC1-203ENST00000454240 ZNF469Q96JG9 3925 aaPredicted RBP23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 F12P00748 615 aaPredicted RBP23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 OPRL1P41146 370 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 EFNA4P52798 201 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 SLC34A1Q06495 639 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 PSG7Q13046 419 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 OCLNQ16625 522 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 MOGQ16653 247 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 RAB1BQ9H0U4 201 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 GPR160Q9UJ42 338 aa23.94■■□□□ 1.42
SMARCC1-203ENST00000454240 ITPR3Q14573 2671 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 LCATP04180 440 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 GABRB1P18505 474 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 PRKXP51817 358 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 TMED1Q13445 227 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 NKPD1Q17RQ9 610 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 FBXW12Q6X9E4 464 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 RFKQ969G6 155 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 RNPEPL1Q9HAU8 725 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 CELSR1Q9NYQ6 3014 aa23.93■■□□□ 1.42
SMARCC1-203ENST00000454240 SBK2P0C263 348 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 MEDAGQ5VYS4 303 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 ENTHD1Q8IYW4 607 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 ZNF555Q8NEP9 628 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 RHOXF1Q8NHV9 184 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 HAVCR1Q96D42 359 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 CMBLQ96DG6 245 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 PTTG3PQ9NZH4 202 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 COPS3Q9UNS2 423 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 TMEM14AQ9Y6G1 99 aa23.92■■□□□ 1.42
SMARCC1-203ENST00000454240 ENTPD6O75354 484 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 H2BFMP0C1H6 154 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 NAT2P11245 290 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 RAC2P15153 192 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 KITLGP21583 273 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 HSD11B1P28845 292 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 SLC6A9P48067 706 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 MMP15P51511 669 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 ALKBH6Q3KRA9 238 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 DNM1P46Q6ZS02 220 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 TGIF2LYQ8IUE0 185 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 OR51G2Q8NGK0 314 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 NEU4Q8WWR8 484 aaPredicted RBP23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 MNTQ99583 582 aa23.91■■□□□ 1.42
SMARCC1-203ENST00000454240 H0YHG0 523 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 SSX4O60224 188 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 MPZL2O60487 215 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 APOC1P02654 83 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 POU4F2Q12837 409 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 HLXQ14774 488 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms