RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NIPSNAP2O75323 286 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 VAPBO95292 243 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 SERPINA7P05543 415 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 HCKP08631 526 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 H2BFMP0C1H6 154 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 HSMCR30P0CW71 290 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 COX6A1P12074 109 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 BCKDHAP12694 445 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 ANXA8P13928 327 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 SDC1P18827 310 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 OGNP20774 298 aaKnown RBP3.46□□□□□ -1.86
LINC00393-202ENST00000452852 RPL22P35268 128 aaKnown RBP3.46□□□□□ -1.86
LINC00393-202ENST00000452852 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
LINC00393-202ENST00000452852 LIM2P55344 173 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 SKP1P63208 163 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 CDK16Q00536 496 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 COX10Q12887 443 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 CALCOCO2Q13137 446 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 LAGE3Q14657 143 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 ARHGAP19Q14CB8 494 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 KLHL38Q2WGJ6 581 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 MS4A18Q3C1V0 323 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 TIGITQ495A1 244 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 ACSBG2Q5FVE4 666 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 VWA2Q5GFL6 755 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 FAM120AOSQ5T036 256 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 ANXA8L1Q5VT79 327 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 LIPNQ5VXI9 398 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 FRMPD2BQ6IN97 320 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 TBC1D19Q8N5T2 526 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 KIR3DL3Q8N743 410 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 SDR9C7Q8NEX9 313 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 OR2A1Q8NGT9 310 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 FNDC8Q8TC99 324 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 ST8SIA1Q92185 356 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 C8orf44Q96CB5 159 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 TIMD4Q96H15 378 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF285Q96NJ3 590 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 CCDC28BQ9BUN5 200 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 BARHL1Q9BZE3 327 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 PCBD2Q9H0N5 130 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 GLIPR2Q9H4G4 154 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 GALPQ9UBC7 116 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 TAC3Q9UHF0 121 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 PCYOX1Q9UHG3 505 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 GUCA1BQ9UMX6 200 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 IGLV3-12A0A075B6K2 115 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 IGHV1-45A0A0A0MS14 117 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 A0A1W2PPV9 198 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 SAGE2PA6NJ88 616 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ACOD1A6NK06 481 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 RPL37AP8A6NKH3 93 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 GOLGA8KD6RF30 607 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 GOLGA8TH3BQL2 631 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 CCL21O00585 134 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 TAPBPO15533 448 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 TRIM3O75382 744 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 WBP4O75554 376 aaKnown RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 DIRAS1O95057 198 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 IGHV3-9P01782 118 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 FGGP02679 453 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 STSP08842 583 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 SLC35G6P0C7Q6 338 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 MPC1LP0DKB6 136 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ERGP11308 486 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ETS2P15036 469 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 SPRP35270 261 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 SLC26A3P40879 764 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ARHGDIAP52565 204 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ERVK11-1P61568 191 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 RPS15AP62244 130 aaKnown RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 RELAQ04206 551 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 PRDX1Q06830 199 aaKnown RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 IL18R1Q13478 541 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 FAM53BQ14153 422 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 GRB7Q14451 532 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 CCSMST1Q4G0I0 132 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 DMRTC1Q5HYR2 192 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 CARD17Q5XLA6 110 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF57Q68EA5 555 aaPredicted RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF470Q6ECI4 717 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 NIPAL1Q6NVV3 410 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 CLEC2AQ6UVW9 174 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 PAQR7Q86WK9 346 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 IFNEQ86WN2 208 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 Q8NBF4 154 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 BBOF1Q8ND07 529 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 CATSPER1Q8NEC5 780 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 OR10A7Q8NGE5 316 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 KCNG3Q8TAE7 436 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 AENQ8WTP8 325 aaKnown RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 TRUB1Q8WWH5 349 aaKnown RBP3.45□□□□□ -1.86
LINC00393-202ENST00000452852 OR5B2Q96R09 309 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 KIFC1Q9BW19 673 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 PARD6BQ9BYG5 372 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 ANKHQ9HCJ1 492 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 LZTFL1Q9NQ48 299 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 TREX1Q9NSU2 369 aa3.45□□□□□ -1.86
LINC00393-202ENST00000452852 C20orf96Q9NUD7 363 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms