RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 VAT1Q99536 393 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 FAM173AQ9BQD7 235 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 AGMATQ9BSE5 352 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 TIPINQ9BVW5 301 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 MEPEQ9NQ76 525 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 GLTPQ9NZD2 209 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 IL17CQ9P0M4 197 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 Q9UF83 564 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 FBXO5Q9UKT4 447 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 SNX10Q9Y5X0 201 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ALG5Q9Y673 324 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 KIF24Q5T7B8 1368 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZMYM2Q9UBW7 1377 aa3.71□□□□□ -1.82
HMGB3P21-201ENST00000452483 FANCIQ9NVI1 1328 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SYCE1LA8MT33 242 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SMKR1H3BMG3 65 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF749O43361 778 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 IGHV2-5P01817 119 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 NHLRC4P0CG21 123 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 WARSP23381 471 aaKnown RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 IFNGR2P38484 337 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PLA2G5P39877 138 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 CEACAM6P40199 344 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 KIR2DS4P43632 304 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 RPL5P46777 297 aaKnown RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PTH2RP49190 550 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ATP4BP51164 291 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 GPM6AP51674 278 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 RND3P61587 244 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ARG2P78540 354 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 BCL2L1Q07817 233 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF155Q12901 538 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF154Q13106 437 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 TOMM34Q15785 309 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 TTLL9Q3SXZ7 439 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 TPTE2P1Q5T6R2 138 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 WDR82Q6UXN9 313 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM144Q7Z5S9 345 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ISCA2Q86U28 154 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 NIT1Q86X76 327 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 DHFR2Q86XF0 187 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PRIMA1Q86XR5 153 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SLC22A15Q8IZD6 547 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 KIRREL3Q8IZU9 778 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR52B6Q8NGF0 335 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR1L3Q8NH93 324 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 COQ8AQ8NI60 647 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 RNASE11Q8TAA1 199 aaKnown RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 C16orf78Q8WTQ4 265 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 CRYGNQ8WXF5 182 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 RASL10AQ92737 203 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 MED8Q96G25 268 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SFRP2Q96HF1 295 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 MAGEB18Q96M61 343 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 RCHY1Q96PM5 261 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR2V2Q96R30 315 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PSMB7Q99436 277 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 GPR21Q99679 349 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 DOK1Q99704 481 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 DHRS9Q9BPW9 319 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PDCD1LG2Q9BQ51 273 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 AIF1LQ9BQI0 150 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 MRPL45Q9BRJ2 306 aaKnown RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 DUSP26Q9BV47 211 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 OSBPL11Q9BXB4 747 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PECRQ9BY49 303 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SLC19A3Q9BZV2 496 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZBTB20Q9HC78 741 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 MYOZ1Q9NP98 299 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 EXOSC4Q9NPD3 245 aaKnown RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF225Q9UK10 706 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 MMP17Q9ULZ9 603 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 C14orf166Q9Y224 244 aaKnown RBP3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 PPP2R2CQ9Y2T4 447 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 CPQQ9Y646 472 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SCRIBQ14160 1630 aa3.7□□□□□ -1.82
HMGB3P21-201ENST00000452483 SNAPC4Q5SXM2 1469 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 A0A1W2PPI3 338 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SMIM9A6NGZ8 99 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF233A6NK53 670 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF724A8MTY0 619 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TSTD3H0UI37 97 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 M0QZK8 103 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SULT2B1O00204 365 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF593O00488 134 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 NME4O00746 187 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 NUPL2O15504 423 aaKnown RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ERI3O43414 337 aaKnown RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 MED6O75586 246 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 NUDT14O95848 222 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CD74P04233 296 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ARG1P05089 322 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 HOXC4P09017 264 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 NBEAP1P0C6P0 100 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZDHHC11BP0C7U3 371 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 RNF224P0DH78 156 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CT45A6P0DMU7 189 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms