RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 OR8G5Q8NG78 346 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 OR13G1Q8NGZ3 307 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 NANPQ8TBE9 248 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 ATF6BQ99941 703 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 HCAR1Q9BXC0 346 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 TMPRSS13Q9BYE2 586 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 FN3KQ9H479 309 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 EGLN3Q9H6Z9 239 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 C7orf69Q9H7B7 122 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 CDH10Q9Y6N8 788 aa10.88□□□□□ -0.67
CHD3-206ENST00000452447 B2RBV5 119 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 HAX1O00165 279 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 RGS9O75916 674 aaPredicted RBP10.87□□□□□ -0.67
CHD3-206ENST00000452447 IGHV2-70P01814 119 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 ZNF823P16415 610 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 EPHA1P21709 976 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 HMGA2P52926 109 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 BTG1P62324 171 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 DBPQ10586 325 aaPredicted RBP10.87□□□□□ -0.67
CHD3-206ENST00000452447 TMEM155Q4W5P6 130 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 CFAP77Q6ZQR2 320 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
CHD3-206ENST00000452447 BHLHE23Q8NDY6 225 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 OR10AD1Q8NGE0 317 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 OR9Q2Q8NGE9 314 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 NSL1Q96IY1 281 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 TRIM15Q9C019 465 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 WDR76Q9H967 626 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 CYB5R1Q9UHQ9 305 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 LYVE1Q9Y5Y7 322 aa10.87□□□□□ -0.67
CHD3-206ENST00000452447 IFNL4K9M1U5 179 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 VENTXO95231 258 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 LCATP04180 440 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 SELEP16581 610 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 ADRA2CP18825 462 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 SRP9P49458 86 aaKnown RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 MALLQ13021 153 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 HNRNPA0Q13151 305 aaKnown RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 C1QL2Q7Z5L3 287 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 LRRC28Q86X40 367 aaPredicted RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 ARHGAP24Q8N264 748 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 FITM2Q8N6M3 262 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 PROKR2Q8NFJ6 384 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 BTBD10Q9BSF8 475 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 C1QTNF5Q9BXJ0 243 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 MUC13Q9H3R2 512 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 YY1AP1Q9H869 796 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 GCM1Q9NP62 436 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 TMEM100Q9NV29 134 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 KCNG2Q9UJ96 466 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 PPIAL4EA0A075B759 164 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 PPIAL4CA0A0B4J2A2 164 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 IQCF6A8MYZ5 107 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 PPIAL4DF5H284 164 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 CCNB2O95067 398 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 GASTP01350 101 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 ACSM4P0C7M7 580 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 PPIAL4FP0DN26 164 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 ATP6V1B2P21281 511 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 GGT2P36268 569 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 RBMXP38159 391 aaKnown RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 MDH2P40926 338 aaKnown RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 MMP16P51512 607 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 TPTEP56180 551 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 ZMYND11Q15326 602 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 RSPO1Q2MKA7 263 aaPredicted RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 DHFR2Q86XF0 187 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 MUC20Q8N307 709 aaPredicted RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 CYB561A3Q8NBI2 242 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 AQP11Q8NBQ7 271 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 ZFAND2BQ8WV99 257 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 SPTSSAQ969W0 71 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 MEGF10Q96KG7 1140 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 SLC30A2Q9BRI3 323 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 MAGIXQ9H6Y5 334 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 PATZ1Q9HBE1 687 aaKnown RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 TBC1D23Q9NUY8 699 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 MRPL22Q9NWU5 206 aaKnown RBP10.86□□□□□ -0.67
CHD3-206ENST00000452447 IL20Q9NYY1 176 aa10.86□□□□□ -0.67
CHD3-206ENST00000452447 LRRC30A6NM36 301 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 BHLHE40O14503 412 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 ZFP36P26651 326 aaKnown RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 PYCR1P32322 319 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 MAGEA2P43356 314 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 SLC6A9P48067 706 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 TRAP1Q12931 704 aaKnown RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 PPP1R8Q12972 351 aaKnown RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 TRIM25Q14258 630 aaKnown RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 GK2Q14410 553 aaPredicted RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 KRTAP27-1Q3LI81 207 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 ESCO2Q56NI9 601 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 RASSF6Q6ZTQ3 369 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 USP43Q70EL4 1123 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 TRPM8Q7Z2W7 1104 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 BPIFB2Q8N4F0 458 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms