RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 HIST1H3AP68431 136 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 DGCR6Q14129 220 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 HLXQ14774 488 aaPredicted RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 OCLNQ16625 522 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 PDLIM3Q53GG5 364 aaPredicted RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 HIST2H3PS2Q5TEC6 136 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 OR2T2Q6IF00 324 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 C16orf87Q6PH81 154 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 HIST2H3AQ71DI3 136 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 FKBP9P1Q75LS8 142 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 CBLL1Q75N03 491 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 POU5F2Q8N7G0 328 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 CELF2-AS1Q8N7Q2 184 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 SLC7A13Q8TCU3 470 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 ERGIC1Q969X5 290 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 FAM46AQ96IP4 442 aaKnown RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 HSH2DQ96JZ2 352 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 TMEM246Q9BRR3 403 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 PRDM13Q9H4Q3 707 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 RERGLQ9H628 205 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 KRCC1Q9NPI7 259 aaPredicted RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 CMTM6Q9NX76 183 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 PTTG3PQ9NZH4 202 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 CLN8Q9UBY8 286 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 KIR2DS1A0A191URI9 304 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 NDUFAB1O14561 156 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 TXNDC12O95881 172 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 IRF2P14316 349 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 CRABP1P29762 137 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 RPS6KA3P51812 740 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 LIPEQ05469 1076 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 COX10Q12887 443 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 ZNF362Q5T0B9 420 aaPredicted RBP9.09□□□□□ -0.95
USP1-204ENST00000452143 TBPL2Q6SJ96 375 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 DPY19L2P2Q6ZN68 376 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 DCDC5Q6ZRR9 648 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 COLCA1Q6ZS62 124 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 MOGAT3Q86VF5 341 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 SLC15A3Q8IY34 581 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 BHLHE23Q8NDY6 225 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 RP9Q8TA86 221 aaKnown RBP9.09□□□□□ -0.95
USP1-204ENST00000452143 Q8TCH9 128 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 TMIGD2Q96BF3 282 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 RCN3Q96D15 328 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 RSRC1Q96IZ7 334 aaKnown RBP9.09□□□□□ -0.95
USP1-204ENST00000452143 NUDT16L1Q9BRJ7 211 aaKnown RBP9.09□□□□□ -0.95
USP1-204ENST00000452143 HCAR1Q9BXC0 346 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 NUAK2Q9H093 628 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 FGFR1OP2Q9NVK5 253 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 LHFPL6Q9Y693 200 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 ENPP4Q9Y6X5 453 aa9.09□□□□□ -0.95
USP1-204ENST00000452143 IGHV3OR16-10A0A075B7F0 116 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 FAM181BA6NEQ2 426 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 SRRM5B3KS81 715 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 F5H5P2 479 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 H0YL77 283 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 NME4O00746 187 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 SOCS2O14508 198 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 GSTA4O15217 222 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 HOXA3O43365 443 aaPredicted RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 ENSAO43768 121 aaKnown RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 PTP4A3O75365 173 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 ZNF205O95201 554 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 GPANK1O95872 356 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 SERPINA1P01009 418 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 H1F0P07305 194 aaKnown RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 MDKP21741 143 aaPredicted RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 FPR3P25089 353 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 PSMB10P40306 273 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 CD200P41217 278 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 NPY4RP50391 375 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 RPL15P61313 204 aaKnown RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 DEFA6Q01524 100 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 ECH1Q13011 328 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 KCNJ8Q15842 424 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 KRTAP27-1Q3LI81 207 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 FGD3Q5JSP0 725 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 GPR157Q5UAW9 335 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 OTPQ5XKR4 325 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 WDR25Q64LD2 544 aaPredicted RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 PTCHD4Q6ZW05 846 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 TMEM86BQ8N661 226 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 FITM2Q8N6M3 262 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 OR10S1Q8NGN2 331 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 OR11L1Q8NGX0 322 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 OR4F5Q8NH21 305 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 HOPXQ9BPY8 73 aaPredicted RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 SLC22A4Q9H015 551 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 NOX4Q9NPH5 578 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 TMEM100Q9NV29 134 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 ARGLU1Q9NWB6 273 aaPredicted RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 KIF17Q9P2E2 1029 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 RPS6KA6Q9UK32 745 aa9.08□□□□□ -0.96
USP1-204ENST00000452143 NOP16Q9Y3C1 178 aaKnown RBP9.08□□□□□ -0.96
USP1-204ENST00000452143 IGLV1-36A0A0B4J1U3 117 aa9.07□□□□□ -0.96
USP1-204ENST00000452143 MDFIC2A0A1B0GVS7 189 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms