RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	GJC3	Q8NFK1	279 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	OR10AD1	Q8NGE0	317 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	OR52E2	Q8NGJ4	325 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	GNPDA2	Q8TDQ7	276 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	ITLN1	Q8WWA0	313 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	PITX2	Q99697	317 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	WAC	Q9BTA9	647 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	CDADC1	Q9BWV3	514 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	IL1RAP	Q9NPH3	570 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	NDE1	Q9NXR1	346 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	CGGBP1	Q9UFW8	167 aa	Predicted RBP	7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	B9D1	Q9UPM9	204 aa		7.34	□□□□□ -1.23
RFX3-209	ENST00000451859	TRAV20	A0A0B4J274	112 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	OR6C68	A6NDL8	312 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	TVP23A	A6NH52	213 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859		F5H5K5	113 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	TNFRSF11B	O00300	401 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	DEAF1	O75398	565 aa	Predicted RBP	7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	SOX14	O95416	240 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	ANPEP	P15144	967 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	KITLG	P21583	273 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	GSS	P48637	474 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC3A1	Q07837	685 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	TSPAN31	Q12999	210 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	CDK5R2	Q13319	367 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.33	□□□□□ -1.24
RFX3-209	ENST00000451859		Q6ZR03	302 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	FITM2	Q8N6M3	262 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	PROKR2	Q8NFJ6	384 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC26A10	Q8NG04	563 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	OR52L1	Q8NGH7	329 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	OR51L1	Q8NGJ5	315 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	OR9Q1	Q8NGQ5	310 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2AJ1	Q8NGZ0	328 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	ST7L	Q8TDW4	575 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	CCDC124	Q96CT7	223 aa	Known RBP	7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	OR2V2	Q96R30	315 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	CCT8L2	Q96SF2	557 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	DIRC2	Q96SL1	478 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	BTBD10	Q9BSF8	475 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	HDHD2	Q9H0R4	259 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	TMEM106B	Q9NUM4	274 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	TBC1D23	Q9NUY8	699 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	KLHL21	Q9UJP4	597 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	PCDHB10	Q9UN67	800 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	PPP1R3C	Q9UQK1	317 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	LYVE1	Q9Y5Y7	322 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	NPTN	Q9Y639	398 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	CDH10	Q9Y6N8	788 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859		U3KQV3	271 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859	FBN3	Q75N90	2809 aa		7.33	□□□□□ -1.24
RFX3-209	ENST00000451859		A0A0G2JMP0	313 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859		A0A0X1KG70	313 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	ARPC3	O15145	178 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	CCNB2	O95067	398 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF205	O95201	554 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	CD55	P08174	381 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	RAC2	P15153	192 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF823	P16415	610 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	SELE	P16581	610 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	TNFRSF1A	P19438	455 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC6A9	P48067	706 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	RGS6	P49758	472 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	MNAT1	P51948	309 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	HIST1H3A	P68431	136 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	COX10	Q12887	443 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	KCNMB1	Q16558	191 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC36A3	Q495N2	470 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	HIST2H3PS2	Q5TEC6	136 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	DCAF12L2	Q5VW00	463 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	SLC18B1	Q6NT16	456 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	PGM2L1	Q6PCE3	622 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	HIST2H3A	Q71DI3	136 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	DHFR2	Q86XF0	187 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	RFLNB	Q8N5W9	214 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	AQP11	Q8NBQ7	271 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	CCDC197	Q8NCU1	140 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	OR4M2	Q8NGB6	313 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	OR5L1	Q8NGL2	311 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	OR8D4	Q8NGM9	314 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	ZNF420	Q8TAQ5	688 aa	Predicted RBP	7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	PTP4A1	Q93096	173 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	APOBEC3D	Q96AK3	386 aa	Predicted RBP	7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	HAVCR1	Q96D42	359 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	NSL1	Q96IY1	281 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	CLPTM1L	Q96KA5	538 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	COG8	Q96MW5	612 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	COQ7	Q99807	217 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	ATF6B	Q99941	703 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	PLA2G12A	Q9BZM1	189 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	MRPL22	Q9NWU5	206 aa	Known RBP	7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	VNN3	Q9NY84	501 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	ACTR3B	Q9P1U1	418 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	SAMHD1	Q9Y3Z3	626 aa	Known RBP	7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	N6AMT1	Q9Y5N5	214 aa		7.32	□□□□□ -1.24
RFX3-209	ENST00000451859	TCRBV5S2	A0A599	114 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859		F5H5P2	479 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859		H0YL77	283 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	SURF4	O15260	269 aa		7.31	□□□□□ -1.24
RFX3-209	ENST00000451859	KRT36	O76013	467 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms