RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PTTG3PQ9NZH4 202 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 ARHGAP32A7KAX9 2087 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 ACOT8O14734 319 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 IGHV2-70P01814 119 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 ACSM4P0C7M7 580 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 PPP1R8Q12972 351 aaKnown RBP16.37■□□□□ 0.21
USP40-207ENST00000450940 GK3PQ14409 553 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 SLC27A4Q6P1M0 643 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 AQP11Q8NBQ7 271 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 OR2T4Q8NH00 348 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 PITX2Q99697 317 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 ATF6BQ99941 703 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 DCAF16Q9NXF7 216 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 BAIAP2Q9UQB8 552 aa16.37■□□□□ 0.21
USP40-207ENST00000450940 IQCF6A8MYZ5 107 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 PNPP00491 289 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 HLA-DQA2P01906 255 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 LIPNQ5VXI9 398 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 OR2T2Q6IF00 324 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 CD300LDQ6UXZ3 194 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 C1orf229Q6ZS94 237 aaPredicted RBP16.36■□□□□ 0.21
USP40-207ENST00000450940 CYB561A3Q8NBI2 242 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 SLC37A3Q8NCC5 494 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 OR10S1Q8NGN2 331 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 OR13G1Q8NGZ3 307 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 ITLN1Q8WWA0 313 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 ZNRF4Q8WWF5 429 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 MAP6Q96JE9 813 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 SIGLEC11Q96RL6 698 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 GAL3ST1Q99999 423 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 SLC30A2Q9BRI3 323 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 RBM4Q9BWF3 364 aaKnown RBP16.36■□□□□ 0.21
USP40-207ENST00000450940 NMNAT2Q9BZQ4 307 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 REEP1Q9H902 201 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 METRNQ9UJH8 293 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 PPP1R3CQ9UQK1 317 aa16.36■□□□□ 0.21
USP40-207ENST00000450940 SAMHD1Q9Y3Z3 626 aaKnown RBP16.36■□□□□ 0.21
USP40-207ENST00000450940 FBN3Q75N90 2809 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 J3QLI3 93 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 IFNL4K9M1U5 179 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 TCF21O43680 179 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 AVPP01185 164 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 RAP2AP10114 183 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 ZNF823P16415 610 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 PYCR1P32322 319 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 TRAP1Q12931 704 aaKnown RBP16.35■□□□□ 0.21
USP40-207ENST00000450940 PCK2Q16822 640 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 TMEM155Q4W5P6 130 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 FAHD2BQ6P2I3 314 aaPredicted RBP16.35■□□□□ 0.21
USP40-207ENST00000450940 NAA40Q86UY6 237 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 LRRC28Q86X40 367 aaPredicted RBP16.35■□□□□ 0.21
USP40-207ENST00000450940 TEX29Q8N6K0 151 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 OR4Q3Q8NH05 313 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 FAHD2AQ96GK7 314 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 ZNF582Q96NG8 517 aaPredicted RBP16.35■□□□□ 0.21
USP40-207ENST00000450940 OR2V2Q96R30 315 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 TSSK6Q9BXA6 273 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 GCM1Q9NP62 436 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 DDX28Q9NUL7 540 aaKnown RBP16.35■□□□□ 0.21
USP40-207ENST00000450940 U3KQV3 271 aa16.35■□□□□ 0.21
USP40-207ENST00000450940 PPIAL4EA0A075B759 164 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 PPIAL4CA0A0B4J2A2 164 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 A0A0G2JMP0 313 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 A0A0X1KG70 313 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 PPIAL4DF5H284 164 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 F5H5K5 113 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 PPIAL4FP0DN26 164 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 GATA3P23771 443 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 OTX1P32242 354 aaPredicted RBP16.34■□□□□ 0.21
USP40-207ENST00000450940 SLC25A1P53007 311 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 SRSF2Q01130 221 aaKnown RBP16.34■□□□□ 0.21
USP40-207ENST00000450940 HNRNPA0Q13151 305 aaKnown RBP16.34■□□□□ 0.21
USP40-207ENST00000450940 ADGRG5Q8IZF4 528 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 OR5AS1Q8N127 324 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 ATG16L2Q8NAA4 619 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 PROKR2Q8NFJ6 384 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 OR4M2Q8NGB6 313 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 CLPTM1LQ96KA5 538 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 C19orf24Q9BVV8 132 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 HCAR1Q9BXC0 346 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 TMPRSS13Q9BYE2 586 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 METTL17Q9H7H0 456 aaPredicted RBP16.34■□□□□ 0.21
USP40-207ENST00000450940 TBC1D23Q9NUY8 699 aa16.34■□□□□ 0.21
USP40-207ENST00000450940 POLR3KQ9Y2Y1 108 aaPredicted RBP16.34■□□□□ 0.21
USP40-207ENST00000450940 A0A0A6YYJ9 748 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 ISPDA4D126 451 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 ARRDC5A6NEK1 342 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 AQP12BA6NM10 295 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 TMEM178BH3BS89 294 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 MLNRO43193 412 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 SBK2P0C263 348 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 SELEP16581 610 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 TPTEP56180 551 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 CRMP1Q14194 572 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 GK2Q14410 553 aaPredicted RBP16.33■□□□□ 0.2
USP40-207ENST00000450940 ZMYND11Q15326 602 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 TEX30Q5JUR7 227 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 AQP12AQ8IXF9 295 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms