RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
USP39-207ENST00000450066 UPK1BO75841 260 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 CRYABP02511 175 aaKnown RBP12.5□□□□□ -0.41
USP39-207ENST00000450066 FSTP19883 344 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 ARF1P84077 181 aaKnown RBP12.5□□□□□ -0.41
USP39-207ENST00000450066 IFITM3Q01628 133 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 ZNF181Q2M3W8 571 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 LUZP2Q86TE4 346 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 SKA3Q8IX90 412 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 OR8B12Q8NGG6 310 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 SPTSSAQ969W0 71 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 FOXJ3Q9UPW0 622 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 AHRRA9YTQ3 701 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 SYT7O43581 403 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 SYNGR3O43761 229 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 SLC2A1P11166 492 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ZNF32P17041 273 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 UCNP55089 124 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ASPHD2Q6ICH7 369 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 CNIH2Q6PI25 160 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ABHD12BQ7Z5M8 362 aaPredicted RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 LRRC28Q86X40 367 aaPredicted RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 UBE2J2Q8N2K1 259 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 SAMD12Q8N8I0 201 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 TRMT10AQ8TBZ6 339 aaKnown RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 TRIB1Q96RU8 372 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ZNF275Q9NSD4 429 aaPredicted RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 MALT1Q9UDY8 824 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 A0A1B0GTI1 187 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 OR6C6A6NF89 314 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ANXA2P2A6NMY6 339 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 TTLL8A6PVC2 850 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 F5H5K5 113 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 PAHP00439 452 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 MAS1P04201 325 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ANXA2P07355 339 aaKnown RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 ZNF12P17014 697 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 ELK1P19419 428 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 CRYGSP22914 178 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 TMPRSS3P57727 454 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 FAPQ12884 760 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ZNF79Q15937 498 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 FAM57BQ71RH2 274 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 OR1F12Q8NHA8 337 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 OR51E1Q8TCB6 317 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
USP39-207ENST00000450066 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 MRI1Q9BV20 369 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 OR2H1Q9GZK4 316 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 SLC17A5Q9NRA2 495 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 ZNF319Q9P2F9 582 aa12.49□□□□□ -0.41
USP39-207ENST00000450066 A0A1B0GVI7 797 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 M0R135 149 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 ZNHIT1O43257 154 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 TBX1O43435 398 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 MMP7P09237 267 aaPredicted RBP12.48□□□□□ -0.41
USP39-207ENST00000450066 CCL1P22362 96 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 PTBP1P26599 531 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP39-207ENST00000450066 OR3A2P47893 321 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 PSG4Q00888 419 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 RGS21Q2M5E4 152 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 FBXW9Q5XUX1 488 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 WNT2BQ93097 391 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 SRRQ9GZT4 340 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 CYSLTR2Q9NS75 346 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 SPATA2Q9UM82 520 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 TP53TG5Q9Y2B4 290 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 N6AMT1Q9Y5N5 214 aa12.48□□□□□ -0.41
USP39-207ENST00000450066 PATE4P0C8F1 98 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 SNRPBP14678 240 aaKnown RBP12.47□□□□□ -0.41
USP39-207ENST00000450066 CFPP27918 469 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 SLC6A9P48067 706 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 KRTAP27-1Q3LI81 207 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 HES5Q5TA89 166 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 DRAM2Q6UX65 266 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FGD2Q7Z6J4 655 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 NAA40Q86UY6 237 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FGFBP3Q8TAT2 258 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 ZNF671Q8TAW3 534 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 SLC7A6Q92536 515 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 EXTL1Q92935 676 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 PGAM5Q96HS1 289 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 CMTM3Q96MX0 182 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 GPR137Q96N19 417 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 WNT5BQ9H1J7 359 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 GPR84Q9NQS5 396 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms