RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 AFF3P51826 1226 aaKnown RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF77Q15935 545 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 MOGAT2Q3SYC2 334 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 THRSPQ92748 146 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 KISS1RQ969F8 398 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF681Q96N22 645 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 LRRC3BQ96PB8 259 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 MTIF3Q9H2K0 278 aaKnown RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 NPDC1Q9NQX5 325 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 TMEM74BQ9NUR3 256 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 NXT1Q9UKK6 140 aaKnown RBP11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PCDHGA1Q9Y5H4 931 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 RNF215Q9Y6U7 377 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 SPTBN2O15020 2390 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF236Q9UL36 1845 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ADH1BP00325 375 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ITGB2P05107 769 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ABOP16442 354 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PPP2CBP62714 309 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PPP2CAP67775 309 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 DPTQ07507 201 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 SLC17A1Q14916 467 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 MLC1Q15049 377 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 HIST2H3PS2Q5TEC6 136 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 BCORP1Q8N888 145 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 SEH1LQ96EE3 360 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 MAP3K3Q99759 626 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 WWTR1Q9GZV5 400 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 SDHAF3Q9NRP4 125 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 LRFN1Q9P244 771 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 WIF1Q9Y5W5 379 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 ZNF318Q5VUA4 2279 aa11.19□□□□□ -0.62
UBE3B-204ENST00000449510 CPED1A4D0V7 1026 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 PHOX2AO14813 284 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 OR2T1O43869 369 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 GALR3O60755 368 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 PTP4A3O75365 173 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 OLFM2O95897 454 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 CCL5P13501 91 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MYOGP15173 224 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 PJVKQ0ZLH3 352 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 C16orf47Q6ZP98 133 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SLC30A7Q8NEW0 376 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 OR5L1Q8NGL2 311 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 OR51F2Q8NH61 342 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 KIRREL1Q96J84 757 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 LMF2Q9BU23 707 aaKnown RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 METTL7AQ9H8H3 244 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 LUZP4Q9P127 313 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 DTX4Q9Y2E6 619 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 A0A087WZY1 265 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 C9orf170A2RU37 121 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SHISA8B8ZZ34 492 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 RFC3P40938 356 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 HOXA1P49639 335 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 PRTGQ2VWP7 1150 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 FBXW12Q6X9E4 464 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 C4orf45Q96LM5 186 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 TIMM29Q9BSF4 260 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MED9Q9NWA0 146 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MPDZO75970 2070 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 PHYHO14832 338 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 C1QL1O75973 258 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 YIF1AO95070 293 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SLC35E2P0CK97 266 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 RPL12P30050 165 aaKnown RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 F2RL1P55085 397 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 RPS4XP62701 263 aaKnown RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SSX2Q16385 188 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MIDNQ504T8 468 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SLC35D3Q5M8T2 416 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 FAM69BQ5VUD6 431 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 BEND4Q6ZU67 534 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 SPRED2Q7Z698 418 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 TMEM123Q8N131 208 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 OR9K2Q8NGE7 335 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 LINC00615Q96LM1 132 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MAGT1Q9H0U3 335 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 NELFAQ9H3P2 528 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 UNKLQ9H9P5 680 aaKnown RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
UBE3B-204ENST00000449510 DNAJB12Q9NXW2 375 aaKnown RBP11.18□□□□□ -0.62
UBE3B-204ENST00000449510 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
UBE3B-204ENST00000449510 A0A1W2PPE2 198 aa11.17□□□□□ -0.62
UBE3B-204ENST00000449510 A8MXK9 166 aa11.17□□□□□ -0.62
UBE3B-204ENST00000449510 ADAM10O14672 748 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms