RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ZNF426Q9BUY5 554 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 SERTAD3Q9UJW9 196 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 MRPS33Q9Y291 106 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 SLC31A1O15431 190 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 TXNDC12O95881 172 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 SERPINA5P05154 406 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 SFTPBP07988 381 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 MAKP20794 623 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 GUCA2AQ02747 115 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 NFATC4Q14934 902 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 KIR2DS3Q14952 304 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 DUSP5Q16690 384 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 FOXRED2Q8IWF2 684 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 FOXRED1Q96CU9 486 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 G6PC3Q9BUM1 346 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 RAB33BQ9H082 229 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 SPACA1Q9HBV2 294 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 CYTL1Q9NRR1 136 aa12.12□□□□□ -0.47
SYNGAP1-204ENST00000449372 DLEU1O43261 78 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 GLCEO94923 617 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 PTNP21246 168 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 MAOAP21397 527 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ARMC6Q6NXE6 501 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF585AQ6P3V2 769 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF610Q8N9Z0 462 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 PNLDC1Q8NA58 520 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF248Q8NDW4 579 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR5AK2Q8NH90 309 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 KISS1RQ969F8 398 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR2M4Q96R27 311 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 SLCO5A1Q9H2Y9 848 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR2C1O95371 312 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 AK4P27144 223 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF674Q2M3X9 581 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 C14orf28Q4W4Y0 310 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 STEAP1BQ6NZ63 245 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 UNQ9370/PRO34162Q6UXP9 181 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 DNM1P46Q6ZS02 220 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 C10orf53Q8N6V4 93 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 GPR148Q8TDV2 347 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 MVB12AQ96EY5 273 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 PELI1Q96FA3 418 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ADAD1Q96M93 576 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 DDA1Q9BW61 102 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 UBQLN4Q9NRR5 601 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 KCNE5Q9UJ90 142 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 CSAG2Q9Y5P2 127 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 EEF1E1-BLOC1S5C9J1V9 151 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 NPSP0C0P6 89 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 THEGLP0DJG4 465 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 IL2RGP31785 369 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 NAA10P41227 235 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF136P52737 540 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 AKR1C8PQ5T2L2 129 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF676Q8N7Q3 588 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR4K13Q8NH42 304 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
SYNGAP1-204ENST00000449372 XRCC3O43542 346 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 RENP00797 406 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 GUSBP08236 651 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZGLP1P0C6A0 271 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 LIPCP11150 499 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 MPZP25189 248 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 GABRA3P34903 492 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 PNLIPRP3Q17RR3 467 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 WDR88Q6ZMY6 472 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 LANCL3Q6ZV70 420 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 CCL4L1Q8NHW4 92 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR5B2Q96R09 309 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 PRSS27Q9BQR3 290 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 SLC25A21Q9BQT8 299 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ASCL3Q9NQ33 180 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 TRAV27A0A087WT01 109 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ARPC3O15145 178 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ASB17Q8WXJ9 295 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 MR1Q95460 341 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 NTNG1Q9Y2I2 539 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 MMP24Q9Y5R2 645 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 IER3IP1Q9Y5U9 82 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 PIN1P1O15428 100 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 QDPRP09417 244 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ZNF888P0CJ79 500 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 PRSS3P35030 304 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 ID4P47928 161 aa12.1□□□□□ -0.47
SYNGAP1-204ENST00000449372 EIF5AP63241 154 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms