RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PLAUP00749 431 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 IGHA1P01876 353 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ADRA2AP08913 450 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 H2BFMP0C1H6 154 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 PIPP12273 146 aaPredicted RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 NR4A1P22736 598 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 CRHBPP24387 322 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 DCKP27707 260 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 PCSK6P29122 969 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 UCP2P55851 309 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 GRB2P62993 217 aaKnown RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ACTC1P68032 377 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ACTA1P68133 377 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 GALK2Q01415 458 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 MVKQ03426 396 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF85Q03923 595 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 HGFACQ04756 655 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 EGR3Q06889 387 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 SPOCK1Q08629 439 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ST3GAL4Q11206 333 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 GALEQ14376 348 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 RBM48Q5RL73 367 aaKnown RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF684Q5T5D7 378 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 KCTD18Q6PI47 426 aaPredicted RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 SLC22A25Q6T423 547 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF322Q6U7Q0 402 aaPredicted RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 LRRN1Q6UXK5 716 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 C8orf86Q6ZUL3 223 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 SSX6Q7RTT6 188 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 KCTD20Q7Z5Y7 419 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 LHFPL3Q86UP9 236 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 NAA40Q86UY6 237 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF679Q8IYX0 411 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF786Q8N393 782 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 RFLNBQ8N5W9 214 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF540Q8NDQ6 660 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 LILRB1Q8NHL6 650 aaPredicted RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 IPCEF1Q8WWN9 437 aaPredicted RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 SPTSSAQ969W0 71 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 TMEM80Q96HE8 168 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 C4orf45Q96LM5 186 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 OR8B4Q96RC9 309 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 KCNJ15Q99712 375 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 KCNS3Q9BQ31 491 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ZNF649Q9BS31 505 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 RHNO1Q9BSD3 238 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 COPS4Q9BT78 406 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 JAM3Q9BX67 310 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 MROQ9BYG7 248 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 DUSP21Q9H596 190 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 ELOVL3Q9HB03 270 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 CDH20Q9HBT6 801 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 INPP5EQ9NRR6 644 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 FKBP14Q9NWM8 211 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 EIF3KQ9UBQ5 218 aaKnown RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 DIMT1Q9UNQ2 313 aaKnown RBP6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 TPRKBQ9Y3C4 175 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 GRIP1Q9Y3R0 1128 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 RNF115Q9Y4L5 304 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 SPEF1Q9Y4P9 236 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 HECTD1Q9ULT8 2610 aa6.52□□□□□ -1.37
AC004540.1-206ENST00000448056 METTL15A6NJ78 407 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 ATP6V1G2-DDX39BF2Z307 99 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 PSMD9O00233 223 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 SULT1C4O75897 302 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 NGFP01138 241 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 ACSM4P0C7M7 580 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 LIMS3P0CW19 117 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 LIMS4P0CW20 117 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 C21orf33P30042 268 aaPredicted RBP6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 OTX1P32242 354 aaPredicted RBP6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 DCTDP32321 178 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 WNT5AP41221 380 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 RAD52P43351 418 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 ETV1P50549 477 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 PRKXP51817 358 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 TPTEP56180 551 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 SLC35A2P78381 396 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 CDONQ4KMG0 1287 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 ADAM5Q6NVV9 412 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 ARL9Q6T311 187 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 DRAM2Q6UX65 266 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 PLEKHG7Q6ZR37 379 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 COLCA1Q6ZS62 124 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 AHSA2Q719I0 299 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 KRT77Q7Z794 578 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 EGFL6Q8IUX8 553 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 STX19Q8N4C7 294 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 NUP37Q8NFH4 326 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 MYDGFQ969H8 173 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 C14orf79Q96F83 325 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 MYCBPQ99417 103 aaPredicted RBP6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 C1QTNF5Q9BXJ0 243 aa6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 YTHDF1Q9BYJ9 559 aaKnown RBP6.51□□□□□ -1.37
AC004540.1-206ENST00000448056 NIPAL2Q9H841 368 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms