RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 GKN3PP0CG01 181 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 GOLGA8HP0CJ92 632 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 PSKH1P11801 424 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 F2RP25116 425 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 PRKAR2BP31323 418 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 RPL34P49207 117 aaKnown RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 RGS6P49758 472 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 FADDQ13158 208 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 AQP6Q13520 282 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 ZNHIT3Q15649 155 aaPredicted RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 POU2AF1Q16633 256 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 ZSCAN26Q16670 478 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 IDNKQ5T6J7 187 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 NPSR1Q6W5P4 371 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 FAM220AQ7Z4H9 259 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 OAFQ86UD1 273 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 HIPK1Q86Z02 1210 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 NAXDQ8IW45 347 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 BBS7Q8IWZ6 715 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 FAM71AQ8IYT1 594 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 PNKDQ8N490 385 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 LRRC52Q8N7C0 313 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 OR51G1Q8NGK1 321 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 OR5AK3PQ8NH89 298 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 CDC26Q8NHZ8 85 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 ZNF461Q8TAF7 563 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 MCOLN3Q8TDD5 553 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 RNASEH2CQ8TDP1 164 aaKnown RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 DNAJB3Q8WWF6 145 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 TMEM234Q8WY98 164 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 PPP1R14BQ96C90 147 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 PGLYRP2Q96PD5 576 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 RANBP9Q96S59 729 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 LITAFQ99732 161 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 EBF4Q9BQW3 602 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 OSBPL11Q9BXB4 747 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 TRIM15Q9C019 465 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 POLR2J2Q9GZM3 115 aaKnown RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 POLR2J3Q9H1A7 115 aaKnown RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 UGT1A7Q9HAW7 530 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 UGT1A8Q9HAW9 530 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 TREX1Q9NSU2 369 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 NLE1Q9NVX2 485 aaPredicted RBP2.95□□□□□ -1.94
PMS1-216ENST00000447734 USE1Q9NZ43 259 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 ACOT9Q9Y305 439 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 KLF12Q9Y4X4 402 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 SLC25A15Q9Y619 301 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 KCNE3Q9Y6H6 103 aa2.95□□□□□ -1.94
PMS1-216ENST00000447734 ABCB11O95342 1321 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 TRAV39A0A0B4J263 110 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 A0A0B4J2E0 115 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 TMEM210A6NLX4 147 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 SYCE1LA8MT33 242 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 HIDE1A8MVS5 230 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 SHISA9B4DS77 424 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 H7C1H1 209 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 CDC40O60508 579 aaKnown RBP eCLIP2.94□□□□□ -1.94
PMS1-216ENST00000447734 ZNF780AO75290 641 aaPredicted RBP2.94□□□□□ -1.94
PMS1-216ENST00000447734 CSF3P09919 207 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 PGA4P0DJD7 388 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 PGA3P0DJD8 388 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 PGA5P0DJD9 388 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 CD37P11049 281 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 HLA-DMAP28067 261 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 BTCP35070 178 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 HRH1P35367 487 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 TAS2R19P59542 299 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 CXCL6P80162 114 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 RPL18AQ02543 176 aaKnown RBP2.94□□□□□ -1.94
PMS1-216ENST00000447734 PRKCDQ05655 676 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 MED21Q13503 144 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 RAB31Q13636 194 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 ARFRP1Q13795 201 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 ZNF266Q14584 549 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 GUSBP1Q15486 140 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 UAP1Q16222 522 aaPredicted RBP2.94□□□□□ -1.94
PMS1-216ENST00000447734 PRR4Q16378 134 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 BCL2A1Q16548 175 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 SAPCD1Q5SSQ6 148 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 FAM27D1Q5T7N8 215 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 ANKRD22Q5VYY1 191 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 THOC7Q6I9Y2 204 aaKnown RBP2.94□□□□□ -1.94
PMS1-216ENST00000447734 OR2T5Q6IEZ7 315 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 LCN12Q6JVE5 192 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 MRPL52Q86TS9 123 aaKnown RBP2.94□□□□□ -1.94
PMS1-216ENST00000447734 RAB43Q86YS6 212 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 ATPAF2Q8N5M1 289 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 CHST4Q8NCG5 386 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 OR1N2Q8NGR9 330 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 OR2T29Q8NH02 315 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 SFXN5Q8TD22 340 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 GEMIN6Q8WXD5 167 aaKnown RBP2.94□□□□□ -1.94
PMS1-216ENST00000447734 IL22RA2Q969J5 263 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 FAM3DQ96BQ1 224 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 SGTBQ96EQ0 304 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 C18orf12Q96KH6 178 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 PSMB7Q99436 277 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 GABRG3Q99928 467 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 RSG1Q9BU20 258 aa2.94□□□□□ -1.94
PMS1-216ENST00000447734 ZNF426Q9BUY5 554 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms