RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 SDR9C7Q8NEX9 313 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 OR5L1Q8NGL2 311 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 GCDHQ92947 438 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-205ENST00000447041 IFT27Q9BW83 186 aa15.29■□□□□ 0.04
COL9A1-205ENST00000447041 POLR3KQ9Y2Y1 108 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-205ENST00000447041 IQCF6A8MYZ5 107 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 ARPC2O15144 300 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 ARPC3O15145 178 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 RENP00797 406 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 FABP3P05413 133 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 ZNF12P17014 697 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 SMIM11AP58511 58 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 ZNF154Q13106 437 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 KRTAP27-1Q3LI81 207 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 ARMCX4Q5H9R4 360 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 SLC18B1Q6NT16 456 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 PGAM4Q8N0Y7 254 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 OR13G1Q8NGZ3 307 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 POP5Q969H6 163 aaKnown RBP15.28■□□□□ 0.04
COL9A1-205ENST00000447041 NSMCE2Q96MF7 247 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 ZNF582Q96NG8 517 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-205ENST00000447041 SLC30A2Q9BRI3 323 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 CD300AQ9UGN4 299 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 PPIAL4AQ9Y536 164 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 INSIG2Q9Y5U4 225 aa15.28■□□□□ 0.04
COL9A1-205ENST00000447041 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 OR6C68A6NDL8 312 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 F5H5P2 479 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 ACSM4P0C7M7 580 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 SELEP16581 610 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 NOS3P29474 1203 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 GSSP48637 474 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 UBA52P62987 128 aaKnown RBP15.27■□□□□ 0.04
COL9A1-205ENST00000447041 ESCO2Q56NI9 601 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 KLF17Q5JT82 389 aaPredicted RBP15.27■□□□□ 0.04
COL9A1-205ENST00000447041 SLC27A4Q6P1M0 643 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 ZNF620Q6ZNG0 422 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 COLCA1Q6ZS62 124 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 ZBTB46Q86UZ6 589 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 MOGAT3Q86VF5 341 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 MUC20Q8N307 709 aaPredicted RBP15.27■□□□□ 0.04
COL9A1-205ENST00000447041 MCUR1Q96AQ8 359 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 C1QTNF5Q9BXJ0 243 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 PLA2G12AQ9BZM1 189 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 NSRP1Q9H0G5 558 aaKnown RBP15.27■□□□□ 0.04
COL9A1-205ENST00000447041 PNRC2Q9NPJ4 139 aaKnown RBP15.27■□□□□ 0.04
COL9A1-205ENST00000447041 AUP1Q9Y679 476 aa15.27■□□□□ 0.04
COL9A1-205ENST00000447041 F5H5K5 113 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 HLA-DPB1P04440 258 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 FPR2P25090 351 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 GGT2P36268 569 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 SRP9P49458 86 aaKnown RBP15.26■□□□□ 0.03
COL9A1-205ENST00000447041 SAMD4BQ5PRF9 694 aaKnown RBP15.26■□□□□ 0.03
COL9A1-205ENST00000447041 SLC35F1Q5T1Q4 408 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 PGBD2Q6P3X8 592 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 NAA40Q86UY6 237 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 SIGLECL1Q8N7X8 197 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 CDRT15Q96T59 188 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 PITX2Q99697 317 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 ATF6BQ99941 703 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 EGLN3Q9H6Z9 239 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 ARL8BQ9NVJ2 186 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 MRPL22Q9NWU5 206 aaKnown RBP15.26■□□□□ 0.03
COL9A1-205ENST00000447041 ZNF69Q9UC07 566 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 OR5V1Q9UGF6 321 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 NUP50Q9UKX7 468 aa15.26■□□□□ 0.03
COL9A1-205ENST00000447041 HLA-DQA2P01906 255 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 WNT2P09544 360 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 RPS2P15880 293 aaKnown RBP15.25■□□□□ 0.03
COL9A1-205ENST00000447041 RPS27P42677 84 aaKnown RBP15.25■□□□□ 0.03
COL9A1-205ENST00000447041 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL9A1-205ENST00000447041 TRAP1Q12931 704 aaKnown RBP15.25■□□□□ 0.03
COL9A1-205ENST00000447041 TSPAN31Q12999 210 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 GK2Q14410 553 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-205ENST00000447041 TUSC1Q2TAM9 212 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 CLEC12AQ5QGZ9 265 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 FAM201AQ5SY85 155 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 CPLX4Q7Z7G2 160 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 ZDHHC21Q8IVQ6 265 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 BCL6BQ8N143 479 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-205ENST00000447041 C3orf56Q8N813 242 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 OR9Q2Q8NGE9 314 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 OR52E2Q8NGJ4 325 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 OR2AJ1Q8NGZ0 328 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 GNPDA2Q8TDQ7 276 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 MRI1Q9BV20 369 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 CDADC1Q9BWV3 514 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 HCAR1Q9BXC0 346 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 NTN4Q9HB63 628 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 TMEM165Q9HC07 324 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 IL1RAPQ9NPH3 570 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 CYB5R1Q9UHQ9 305 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 TMCC3Q9ULS5 477 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 LRCH1Q9Y2L9 728 aa15.25■□□□□ 0.03
COL9A1-205ENST00000447041 A0A1B0GWJ7 208 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 IFNL4K9M1U5 179 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 PSKH1P11801 424 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 ANOS1P23352 680 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 PYCR1P32322 319 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 IFNGR2P38484 337 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms