RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 N6AMT1Q9Y5N5 214 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 TMEM272A0A1B0GTI8 110 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 XRCC3O43542 346 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 KRT33AO76009 404 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 KDM4BO94953 1096 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 ARSBP15848 533 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 SDHBP21912 280 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 GIFP27352 417 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 HTR2CP28335 458 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 CASRP41180 1078 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 CCR6P51684 374 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 AIMP2Q13155 320 aaKnown RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 OR1C1Q15619 314 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 C20orf196Q8IYI0 205 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 OR8B12Q8NGG6 310 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 FCAMRQ8WWV6 532 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 SOX7Q9BT81 388 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 ULBP2Q9BZM5 246 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 FAM117AQ9C073 453 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 MOB1AQ9H8S9 216 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 CDV3Q9UKY7 258 aaKnown RBP15.4■□□□□ 0.06
SMC6-206ENST00000446852 RCE1Q9Y256 329 aa15.4■□□□□ 0.06
SMC6-206ENST00000446852 ZNF407Q9C0G0 2248 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 CELA3AP09093 270 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 CX3CR1P49238 355 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 CBX3Q13185 183 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 DYRK1AQ13627 763 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 ATP1A1-AS1Q5TC04 95 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 ABLIM2Q6H8Q1 611 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 LUZP2Q86TE4 346 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 LRRC18Q8N456 261 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 BEX2Q9BXY8 128 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 DPAGT1Q9H3H5 408 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 RHBDD3Q9Y3P4 386 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 ZFHX4Q86UP3 3567 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 TRAV6A0A075B6T7 132 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 LOC390937A0A1W2PQ73 354 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 CIB4A0PJX0 185 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 GGT3PA6NGU5 568 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 SNTB2Q13425 540 aaKnown RBP15.39■□□□□ 0.05
SMC6-206ENST00000446852 TGIF1Q15583 401 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 TMEM255AQ5JRV8 349 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 SULF2Q8IWU5 870 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 JAGN1Q8N5M9 183 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 OR6M1Q8NGM8 313 aa15.39■□□□□ 0.05
SMC6-206ENST00000446852 ZNF845Q96IR2 970 aaPredicted RBP15.39■□□□□ 0.05
SMC6-206ENST00000446852 C7orf50Q9BRJ6 194 aaKnown RBP15.39■□□□□ 0.05
SMC6-206ENST00000446852 DNAJC13O75165 2243 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 MEGF11A6BM72 1044 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 TCRBP04435 133 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 GUCA1AP43080 201 aaPredicted RBP15.38■□□□□ 0.05
SMC6-206ENST00000446852 GALK2Q01415 458 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 KCNJ8Q15842 424 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 ZNF813Q6ZN06 617 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 UTS2BQ765I0 119 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 PNPLA2Q96AD5 504 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 CACNG6Q9BXT2 260 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 RANGRFQ9HD47 186 aaPredicted RBP15.38■□□□□ 0.05
SMC6-206ENST00000446852 ABI3Q9P2A4 366 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 LOC400499M0QZD8 3231 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 SPAARA0A1B0GVQ0 90 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 FTH1P19P0C7X4 201 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 GNALP38405 381 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 BTG1P62324 171 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 MRPS10P82664 201 aaKnown RBP15.38■□□□□ 0.05
SMC6-206ENST00000446852 DNM1P46Q6ZS02 220 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 INTS12Q96CB8 462 aaKnown RBP15.38■□□□□ 0.05
SMC6-206ENST00000446852 DMRTB1Q96MA1 342 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 IP6K3Q96PC2 410 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 SLC5A6Q9Y289 635 aa15.38■□□□□ 0.05
SMC6-206ENST00000446852 A0A1B0GVI7 797 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 C5orf63A6NC05 138 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 OR5H15A6NDH6 313 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 E9PLN8 166 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 ACOT7O00154 380 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 GMDSO60547 372 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 GRB2P62993 217 aaKnown RBP15.37■□□□□ 0.05
SMC6-206ENST00000446852 C1orf100Q5SVJ3 147 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 ABHD12BQ7Z5M8 362 aaPredicted RBP15.37■□□□□ 0.05
SMC6-206ENST00000446852 ZNF283Q8N7M2 679 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 NKAIN3Q8N8D7 197 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 CLEC1AQ8NC01 280 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 OR4D6Q8NGJ1 314 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 FYTTD1Q96QD9 318 aaKnown RBP15.37■□□□□ 0.05
SMC6-206ENST00000446852 B3GNT4Q9C0J1 378 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 HRASLSQ9HDD0 168 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 GPR84Q9NQS5 396 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 HIST1H3AP68431 136 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 HIST2H3PS2Q5TEC6 136 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 HIST2H3AQ71DI3 136 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 FAM57BQ71RH2 274 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 GJC3Q8NFK1 279 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 NEK6Q9HC98 313 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 SLC17A5Q9NRA2 495 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 NUBP2Q9Y5Y2 271 aa15.37■□□□□ 0.05
SMC6-206ENST00000446852 CNOT1A5YKK6 2376 aaKnown RBP15.37■□□□□ 0.05
SMC6-206ENST00000446852 ANKRD20A5PA0PJZ0 165 aa15.36■□□□□ 0.05
SMC6-206ENST00000446852 FAM166BA8MTA8 275 aa15.36■□□□□ 0.05
SMC6-206ENST00000446852 TPPPO94811 219 aa15.36■□□□□ 0.05
SMC6-206ENST00000446852 HPNP05981 417 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms