RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 THBS2P35442 1172 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 TNFAIP6P98066 277 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-203ENST00000444440 MOGQ16653 247 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 HFEQ30201 348 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 OR2T2Q6IF00 324 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 ARL9Q6T311 187 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 COLCA1Q6ZS62 124 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 C1orf174Q8IYL3 243 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 ADGRG5Q8IZF4 528 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 OR2Z1Q8NG97 314 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 OR51L1Q8NGJ5 315 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 GIPC3Q8TF64 312 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 ITLN1Q8WWA0 313 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 MAP6Q96JE9 813 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 COQ7Q99807 217 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 CADM1Q9BY67 442 aaKnown RBP9.18□□□□□ -0.94
SF3A1-203ENST00000444440 ARMC1Q9NVT9 282 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 IL20Q9NYY1 176 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 CYB5R1Q9UHQ9 305 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 ATPIF1Q9UII2 106 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 BAIAP2Q9UQB8 552 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 POMPQ9Y244 141 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 POLR1DQ9Y2S0 133 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 IGHV3-64DA0A0J9YX35 117 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 TVP23AA6NH52 213 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 MLNRO43193 412 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 GYPBP06028 91 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 ACSM4P0C7M7 580 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 CLUP10909 449 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 SELEP16581 610 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 LIPAP38571 399 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 SEC61A1P61619 476 aaKnown RBP9.17□□□□□ -0.94
SF3A1-203ENST00000444440 HOXA4Q00056 320 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-203ENST00000444440 FBXW12Q6X9E4 464 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 RASSF6Q6ZTQ3 369 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 TMEM179BQ7Z7N9 219 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 AQP11Q8NBQ7 271 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 SLC37A3Q8NCC5 494 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 GJC3Q8NFK1 279 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 OR10AD1Q8NGE0 317 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 OR9Q1Q8NGQ5 310 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 OR51F2Q8NH61 342 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 TMEM158Q8WZ71 300 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 PTP4A1Q93096 173 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 DCLRE1CQ96SD1 692 aaKnown RBP9.17□□□□□ -0.94
SF3A1-203ENST00000444440 NIPSNAP1Q9BPW8 284 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 DGCR6LQ9BY27 220 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 TMPRSS13Q9BYE2 586 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 HDHD2Q9H0R4 259 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF556Q9HAH1 456 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 CYSLTR2Q9NS75 346 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 DNAJB9Q9UBS3 223 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 CGGBP1Q9UFW8 167 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-203ENST00000444440 ZDHHC8Q9ULC8 765 aa9.17□□□□□ -0.94
SF3A1-203ENST00000444440 LOC105371242A0A075B767 164 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 TCRBV3S1A0A5B6 114 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 E2F6O75461 281 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 RAC2P15153 192 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 ZFP36P26651 326 aaKnown RBP9.16□□□□□ -0.94
SF3A1-203ENST00000444440 SRP14P37108 136 aaKnown RBP9.16□□□□□ -0.94
SF3A1-203ENST00000444440 CRMP1Q14194 572 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 SLC36A3Q495N2 470 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 ACSM5Q6NUN0 579 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 CD300LDQ6UXZ3 194 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF283Q8N7M2 679 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 PAPD5Q8NDF8 572 aaKnown RBP9.16□□□□□ -0.94
SF3A1-203ENST00000444440 BHLHE23Q8NDY6 225 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 OR10G2Q8NGC3 310 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF420Q8TAQ5 688 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-203ENST00000444440 OR2V2Q96R30 315 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 DIRC2Q96SL1 478 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 FEVQ99581 238 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 ATF6BQ99941 703 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 GAL3ST1Q99999 423 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 RBM4Q9BWF3 364 aaKnown RBP9.16□□□□□ -0.94
SF3A1-203ENST00000444440 CDADC1Q9BWV3 514 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 TSSK6Q9BXA6 273 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 HCAR1Q9BXC0 346 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 C1QTNF5Q9BXJ0 243 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 EGLN1Q9GZT9 426 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 METTL17Q9H7H0 456 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-203ENST00000444440 TMEM106BQ9NUM4 274 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 TBC1D23Q9NUY8 699 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 UBAP1Q9NZ09 502 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 NPTNQ9Y639 398 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 COMMD3-BMI1R4GMX3 469 aa9.16□□□□□ -0.94
SF3A1-203ENST00000444440 TRAV20A0A0B4J274 112 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 ISPDA4D126 451 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 ARRDC5A6NEK1 342 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 IQCF6A8MYZ5 107 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 F5H5K5 113 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 F5H5P2 479 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 FKBP6O75344 327 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 CIB2O75838 187 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 RGS9O75916 674 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF205O95201 554 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 VENTXO95231 258 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 PNPP00491 289 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 IFNGP01579 166 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms