RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 R4GMQ9 66 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 AHRRA9YTQ3 701 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 BHLHE40O14503 412 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF32P17041 273 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 NHLH1Q02575 133 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 KANSL1Q7Z3B3 1105 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 OR56B1Q8NGI3 324 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 HAS2Q92819 552 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ABCG5Q9H222 651 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 A0A0J9YW62 118 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 IGHV3-64DA0A0J9YX35 117 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 SHC1P29353 583 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 NBL1P41271 181 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 INPP5JQ15735 1006 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 PRSS53Q2L4Q9 553 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 SSX6Q7RTT6 188 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ACBD4Q8NC06 268 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ABHD17AQ96GS6 310 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 SELENOIQ9C0D9 397 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 TICRRQ7Z2Z1 1910 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 IGLV3-12A0A075B6K2 115 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 IGKV3D-11A0A0A0MRZ8 115 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 RECKO95980 971 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 AMY2AP04746 511 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 PVALBP20472 110 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 SPATA46Q5T0L3 261 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 KCTD9Q7L273 389 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 NANOGP1Q8N7R0 232 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 APCDD1LQ8NCL9 501 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 TRAPPC2LQ9UL33 140 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 ICAM5Q9UMF0 924 aa12.59□□□□□ -0.39
SMARCA4-204ENST00000444061 FADS1O60427 444 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 ETV1P50549 477 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 NKX2-5P52952 324 aaPredicted RBP12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 EDDM3BP56851 147 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 LCN10Q6JVE6 187 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 BHLHA15Q7RTS1 189 aaPredicted RBP12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 PRSS33Q8NF86 280 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 STOML3Q8TAV4 291 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 PBOV1Q9GZY1 135 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 OPA3Q9H6K4 179 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 GPR27Q9NS67 375 aa12.58□□□□□ -0.39
SMARCA4-204ENST00000444061 MAGEB4O15481 346 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 CLDN20P56880 219 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 ZNF121P58317 390 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 SMAP2Q8WU79 429 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 EMG1Q92979 244 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 TREM1Q9NP99 234 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 SLCO1C1Q9NYB5 712 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 UBE2J1Q9Y385 318 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 CUL9Q8IWT3 2517 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 CDC42EP2O14613 210 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 CD3EP07766 207 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 CPT2P23786 658 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 FAM76BQ5HYJ3 339 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 EXOSC6Q5RKV6 272 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 SLC7A5P1Q8MH63 180 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 DEFB108BQ8NET1 73 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 SLC30A7Q8NEW0 376 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 OTOSQ8NHW6 89 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 NDNFQ8TB73 568 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 TOMM40LQ969M1 308 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 SYT3Q9BQG1 590 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 MRPL15Q9P015 296 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 ANKRD61A6NGH8 418 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 SCGB1D2O95969 90 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 ACAA2P42765 397 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 FXYD4P59646 89 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 REV1Q9UBZ9 1251 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 AMDHD2Q9Y303 409 aa12.58□□□□□ -0.4
SMARCA4-204ENST00000444061 NME2P1O60361 137 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 NRASP01111 189 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 NME2P22392 152 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 CLDN12P56749 244 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 ZNF658BQ4V348 819 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 OR6M1Q8NGM8 313 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 OPALINQ96PE5 141 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 BEX2Q9BXY8 128 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 BEX1Q9HBH7 125 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 RCE1Q9Y256 329 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 C13orf42A0A1B0GVH6 325 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 A0A1W2PQ09 198 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 TUBAL3A6NHL2 446 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 HSPB6O14558 160 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 CNOT4O95628 575 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 H2AFB2P0C5Z0 115 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 UBBP0CG47 229 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
SMARCA4-204ENST00000444061 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms