RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 GALEQ14376 348 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 SPATA46Q5T0L3 261 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ARL9Q6T311 187 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF101Q8IZC7 436 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 OR1J1Q8NGS3 322 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 IPCEF1Q8WWN9 437 aaPredicted RBP11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 MYDGFQ969H8 173 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 MRPL48Q96GC5 212 aaKnown RBP11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 C4orf36Q96KX1 117 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 C4orf45Q96LM5 186 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 ERVK-18Q9QC07 812 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 LRCH1Q9Y2L9 728 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 SPEF1Q9Y4P9 236 aa11.72□□□□□ -0.53
TM9SF4-204ENST00000442842 METTL15A6NJ78 407 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 TBX1O43435 398 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 RGS10O43665 173 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 MT-ND2P03891 347 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 LCATP04180 440 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 CDK1P06493 297 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 C21orf33P30042 268 aaPredicted RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 PSMB10P40306 273 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 OR12D2P58182 307 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF121P58317 390 aaPredicted RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 PSMA6P60900 246 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 ERVS71-1P61550 626 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 SLC35A2P78381 396 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF829Q3KNS6 432 aaPredicted RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 DRAM2Q6UX65 266 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 NAA40Q86UY6 237 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 KLHL36Q8N4N3 616 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 AKAP1Q92667 903 aaKnown RBP eCLIP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 DCLRE1CQ96SD1 692 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 CLEC4MQ9H2X3 399 aaPredicted RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 FKBP14Q9NWM8 211 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 PTTG3PQ9NZH4 202 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 CLEC2DQ9UHP7 191 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 FZR1Q9UM11 496 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
TM9SF4-204ENST00000442842 HELZ2Q9BYK8 2649 aaKnown RBP11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 ZNF254O75437 659 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 GOSR1O95249 250 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 NGFP01138 241 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 LIMS3P0CW19 117 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 LIMS4P0CW20 117 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 NR4A1P22736 598 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 ANOS1P23352 680 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 RAD52P43351 418 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 RGS6P49758 472 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 UCP2P55851 309 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 ZNF672Q499Z4 452 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 CDONQ4KMG0 1287 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 OR2G6Q5TZ20 316 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 LIPNQ5VXI9 398 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 DEGS2Q6QHC5 323 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 FAM57BQ71RH2 274 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 SPRYD4Q8WW59 207 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 PGAM5Q96HS1 289 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 JAM3Q9BX67 310 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 POFUT1Q9H488 388 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 NIPAL2Q9H841 368 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 CA10Q9NS85 328 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 R4GMQ9 66 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 CACNA1CQ13936 2221 aa11.7□□□□□ -0.54
TM9SF4-204ENST00000442842 PCNX1Q96RV3 2341 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 TMEM269A0A1B0GVZ9 245 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 A0A1W2PPR1 153 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 C5orf63A6NC05 138 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 E7EQL1 145 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 LOC110117498-PIK3R3F6TDL0 507 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 CTAG2O75638 210 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 SULT1C4O75897 302 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 APOC1P02654 83 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 MT-ND5P03915 603 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 TACSTD2P09758 323 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 PCSK6P29122 969 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 OTX1P32242 354 aaPredicted RBP11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 THBS4P35443 961 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 CDH15P55291 814 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 PRSS12P56730 875 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 GABARAPL2P60520 117 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 PPP1CBP62140 327 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 RPS23P62266 143 aaKnown RBP11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 BCL2L15Q5TBC7 163 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 RGS7BPQ6MZT1 257 aaPredicted RBP11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 UNQ6126/PRO20091Q6UXV3 157 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 TMPRSS11AQ6ZMR5 421 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 RHOUQ7L0Q8 258 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 COMMD2Q86X83 199 aa11.69□□□□□ -0.54
TM9SF4-204ENST00000442842 ZNF295-AS1Q8N0V1 137 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms