RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PTH2RP49190 550 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 PRKXP51817 358 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 MAD2L1BPQ15013 274 aaPredicted RBP13.74□□□□□ -0.21
USP39-205ENST00000442708 ZNF691Q5VV52 312 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 KRTAP1-3Q8IUG1 177 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 SLC35F2Q8IXU6 374 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 ZCCHC24Q8N2G6 241 aaKnown RBP13.74□□□□□ -0.21
USP39-205ENST00000442708 DHRSXQ8N5I4 330 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 ZNF454Q8N9F8 522 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 ZNF555Q8NEP9 628 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 OR51G2Q8NGK0 314 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 KLF14Q8TD94 323 aaPredicted RBP13.74□□□□□ -0.21
USP39-205ENST00000442708 COPS4Q9BT78 406 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 C1QTNF5Q9BXJ0 243 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 TTTY10Q9BZA0 68 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 DUSP13Q9UII6 198 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 RRP15Q9Y3B9 282 aaKnown RBP13.74□□□□□ -0.21
USP39-205ENST00000442708 CHD3Q12873 2000 aaKnown RBP13.74□□□□□ -0.21
USP39-205ENST00000442708 M0R135 149 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
USP39-205ENST00000442708 WBP4O75554 376 aaKnown RBP13.73□□□□□ -0.21
USP39-205ENST00000442708 SBK2P0C263 348 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 SLC2A1P11166 492 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 NUDT6P53370 316 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 AQP4P55087 323 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 TESK1Q15569 626 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 ALKBH6Q3KRA9 238 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 ARL9Q6T311 187 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 LRRN1Q6UXK5 716 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 SSX6Q7RTT6 188 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 SYNPRQ8TBG9 265 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 IPCEF1Q8WWN9 437 aaPredicted RBP13.73□□□□□ -0.21
USP39-205ENST00000442708 GTF3AQ92664 365 aaKnown RBP13.73□□□□□ -0.21
USP39-205ENST00000442708 PERPQ96FX8 193 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 ZNF799Q96GE5 643 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 KCNJ15Q99712 375 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 ADI1Q9BV57 179 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 GSX2Q9BZM3 304 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 CXorf56Q9H5V9 222 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 PTTG3PQ9NZH4 202 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 LAMP5Q9UJQ1 280 aa13.73□□□□□ -0.21
USP39-205ENST00000442708 H7C417 338 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 PSMD9O00233 223 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 RRP9O43818 475 aaKnown RBP13.72□□□□□ -0.21
USP39-205ENST00000442708 IGHV4-39P01824 125 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 CAPGP40121 348 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 ALDH3B1P43353 468 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 EVX1P49640 407 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 RGS6P49758 472 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 ART1P52961 327 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 TPTEP56180 551 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 KLF3P57682 345 aaPredicted RBP13.72□□□□□ -0.21
USP39-205ENST00000442708 HLXQ14774 488 aaPredicted RBP13.72□□□□□ -0.21
USP39-205ENST00000442708 TAF13Q15543 124 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 SMN1Q16637 294 aaKnown RBP13.72□□□□□ -0.21
USP39-205ENST00000442708 SNAI3Q3KNW1 292 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 MBNL2Q5VZF2 373 aaKnown RBP13.72□□□□□ -0.21
USP39-205ENST00000442708 TTC23Q5W5X9 447 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 PRSS45Q7RTY3 260 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 CNIH3Q8TBE1 160 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 RFKQ969G6 155 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 SPTSSAQ969W0 71 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 APOBEC3DQ96AK3 386 aaPredicted RBP13.72□□□□□ -0.21
USP39-205ENST00000442708 TBX5Q99593 518 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 FOXC2Q99958 501 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 CLN6Q9NWW5 311 aa13.72□□□□□ -0.21
USP39-205ENST00000442708 VSTM5A8MXK1 200 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 J3QRE1 110 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 IGHV3-13P01766 116 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 LCATP04180 440 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 H2BFMP0C1H6 154 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 MTNR1AP48039 350 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 CX3CR1P49238 355 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 PRSS12P56730 875 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 CXCR4P61073 352 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 ISL1P61371 349 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 SNRPD2P62316 118 aaKnown RBP13.71□□□□□ -0.21
USP39-205ENST00000442708 GRB2P62993 217 aaKnown RBP13.71□□□□□ -0.21
USP39-205ENST00000442708 IL5RAQ01344 420 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 ZNF91Q05481 1191 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 PSG7Q13046 419 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 TMED1Q13445 227 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 ZNF718Q3SXZ3 478 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 C6orf52Q5T4I8 152 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 MEDAGQ5VYS4 303 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 DRAM2Q6UX65 266 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 RHOUQ7L0Q8 258 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 CMBLQ96DG6 245 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 RNFT2Q96EX2 444 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 SORCS2Q96PQ0 1159 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 APOL4Q9BPW4 351 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 AMBNQ9NP70 447 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 TAAR3PQ9P1P4 343 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 LRP12Q9Y561 859 aa13.71□□□□□ -0.21
USP39-205ENST00000442708 CELSR1Q9NYQ6 3014 aa13.71□□□□□ -0.22
USP39-205ENST00000442708 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 A0A1W2PQL4 384 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms