RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DRAM2Q6UX65 266 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 FBXW12Q6X9E4 464 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 CBR4Q8N4T8 237 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 TCEANCQ8N8B7 351 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 OTOSQ8NHW6 89 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 ZNF799Q96GE5 643 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 C18orf12Q96KH6 178 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 KCNJ15Q99712 375 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 ABHD6Q9BV23 337 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 YLPM1P49750 1951 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 HIVEP1P15822 2718 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 CR1P17927 2039 aa12.86□□□□□ -0.35
CSNK1E-210ENST00000442216 PLSCR5A0PG75 271 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 SLC22A31A6NKX4 558 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 E9PQ18 207 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 APOC1P02654 83 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 ADH4P08319 380 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 SLC25A16P16260 332 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 PDLIM4P50479 330 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 MMP15P51511 669 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 CDC42P60953 191 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 PSG7Q13046 419 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 GGTLC2Q14390 218 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 MAD2L1BPQ15013 274 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 TAF13Q15543 124 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 AADACL4Q5VUY2 407 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 SLC16A9Q7RTY1 509 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 GID4Q8IVV7 300 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 ZCCHC24Q8N2G6 241 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 ZNF525Q8N782 197 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 RNF133Q8WVZ7 376 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 FAM168AQ92567 244 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 EME1Q96AY2 570 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 COX4I2Q96KJ9 171 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 COPS4Q9BT78 406 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 YIPF3Q9GZM5 350 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 HAO2Q9NYQ3 351 aa12.85□□□□□ -0.35
CSNK1E-210ENST00000442216 TANC2Q9HCD6 1990 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 LOC390937A0A1W2PQ73 354 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 CCDC182A6NF36 153 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 TRIM64A6NGJ6 449 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 TRIM64BA6NI03 449 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 SELENOFO60613 162 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 BAG2O95816 211 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 LYNP07948 512 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 NAT2P11245 290 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 MRPS11P82912 194 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 TMED1Q13445 227 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 FAM209AQ5JX71 171 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 ZNF786Q8N393 782 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 C10orf105Q8TEF2 133 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 UBASH3BQ8TF42 649 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 CMBLQ96DG6 245 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 IL4I1Q96RQ9 567 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 DIRC2Q96SL1 478 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 TPK1Q9H3S4 243 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 POFUT1Q9H488 388 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 SP140LQ9H930 580 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 CENPMQ9NSP4 180 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 PURGQ9UJV8 347 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 ZDHHC8Q9ULC8 765 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
CSNK1E-210ENST00000442216 FLNAP21333 2647 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 CELSR1Q9NYQ6 3014 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 H7C1Q1 480 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 TIMM8AO60220 97 aaPredicted RBP12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 LY6HO94772 140 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 LCATP04180 440 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 INHBBP09529 407 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 DAOP14920 347 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 SELEP16581 610 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 OPRL1P41146 370 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC6A9P48067 706 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF81P51508 661 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 MALLQ13021 153 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 ALKBH6Q3KRA9 238 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 TMEM255AQ5JRV8 349 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF540Q8NDQ6 660 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 RDH12Q96NR8 316 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 MNTQ99583 582 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC29A1Q99808 456 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 REG4Q9BYZ8 158 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 NIPAL2Q9H841 368 aa12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 WARS2Q9UGM6 360 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-210ENST00000442216 IGHV4-30-2A0A087WSY4 118 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 VWC2LB2RUY7 222 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 ANPEPP15144 967 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 ALOX5APP20292 161 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 GIFP27352 417 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms