RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ZNF787Q6DD87 383 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 UNQ6126/PRO20091Q6UXV3 157 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 BTN2A1Q7KYR7 527 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 GTPBP8Q8N3Z3 284 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 UXS1Q8NBZ7 420 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF680Q8NEM1 530 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRMT10AQ8TBZ6 339 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 SNX33Q8WV41 574 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 GHSRQ92847 366 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 RNASE6Q93091 150 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 BPIFA2Q96DR5 249 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR51B6Q9H340 312 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1W2PQ72 361 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC22A31A6NKX4 558 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 MSTNO14793 375 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC22A5O76082 557 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 VAMP5O95183 116 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 GLI4P10075 376 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 M6PRP20645 277 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SELENOPP49908 381 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF83P51522 516 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 HCCSP53701 268 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 RAC3P60763 192 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF141Q15928 474 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ELFN2Q5R3F8 820 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 OLFML2AQ68BL7 652 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 RPL13AP3Q6NVV1 102 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TUSC5Q8IXB3 177 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 UBASH3BQ8TF42 649 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ABHD3Q8WU67 409 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SGTBQ96EQ0 304 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR2M2Q96R28 347 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 EVA1AQ9H8M9 152 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 PTTG3PQ9NZH4 202 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SPATA2Q9UM82 520 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1B0GVC2 190 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1W2PPL8 197 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A1W2PR80 420 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 A6NIN4 97 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRIM77I1YAP6 450 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 GMDSO60547 372 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR2A4O95047 310 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ACSM3Q53FZ2 586 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 IDNKQ5T6J7 187 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 RIPPLY2Q5TAB7 128 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 BCL2L15Q5TBC7 163 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRIQKQ629K1 86 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SYT9Q86SS6 491 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 LRRTM1Q86UE6 522 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SLC38A6Q8IZM9 456 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF610Q8N9Z0 462 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR2A7Q96R45 310 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ABCG5Q9H222 651 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 PIGMQ9H3S5 423 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRIM36Q9NQ86 728 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 RPRD1BQ9NQG5 326 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 DUSP13Q9UII6 198 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 MED13LQ71F56 2210 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRAV27A0A087WT01 109 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRBV5-5A0A0J9YX44 114 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM240BA0A1B0GVZ2 78 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 PLSCR5A0PG75 271 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 UPK3AO75631 287 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TGM6O95932 706 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF823P16415 610 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ADRA2CP18825 462 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM27E3Q08E93 113 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 TMEM108Q6UXF1 575 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 Q6ZTK2 550 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SAMD12Q8N8I0 201 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 C3orf49Q96BT1 292 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 FBXO17Q96EF6 278 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 GMPPAQ96IJ6 420 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 DHRS9Q9BPW9 319 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 NRIP3Q9NQ35 241 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ABRACLQ9P1F3 81 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 SPRR3Q9UBC9 169 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF629Q9UEG4 869 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF175Q9Y473 711 aa6.53□□□□□ -1.36
CDC42BPA-208ENST00000442054 PTPRBP23467 1997 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A0J9YW62 118 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A1B0GWA3 101 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 MAGEB4O15481 346 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ICMTO60725 284 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 HPNP05981 417 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 HIST1H1CP16403 213 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CALCRP30988 508 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 IDH3GP51553 393 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRPS1P60891 318 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 PUDPQ08623 228 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 PLA2G7Q13093 441 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 TOMM34Q15785 309 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NHLRC3Q5JS37 347 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF813Q6ZN06 617 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CEACAM19Q7Z692 300 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 LYPD6Q86Y78 171 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CMTM4Q8IZR5 234 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms