RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 KANTRA0A1W2PQU2 76 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 SMAD9O15198 467 aaKnown RBP14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 NUPL2O15504 423 aaKnown RBP14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 RAB3AP20336 220 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 BDKRB2P30411 391 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 MMP16P51512 607 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 POU3F1Q03052 451 aaPredicted RBP14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 CORO6Q6QEF8 472 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 LANCL3Q6ZV70 420 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 H1FNTQ75WM6 255 aaPredicted RBP14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 LYPD6Q86Y78 171 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 RELL2Q8NC24 303 aaPredicted RBP14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 PXT1Q8NFP0 134 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 OR6S1Q8NH40 331 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 KCNK17Q96T54 332 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 CNTD2Q9H8S5 307 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 PCDHB16Q9NRJ7 776 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 SLC2A8Q9NY64 477 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 PRELID3BQ9Y3B1 194 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 RAB27BO00194 218 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 EIF1AYO14602 144 aaKnown RBP14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 GNALP38405 381 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF345Q14585 488 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF260Q3ZCT1 412 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 C11orf87Q6NUJ2 197 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 C3orf33Q6P1S2 294 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF813Q6ZN06 617 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 FJX1Q86VR8 437 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 PLXDC1Q8IUK5 500 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 CHST4Q8NCG5 386 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 MFSD8Q8NHS3 518 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 ST8SIA1Q92185 356 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 FGGYQ96C11 551 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 SUSD2Q9UGT4 822 aa14.73□□□□□ -0.05
SEMA3B-207ENST00000441915 A0A1B0GX78 115 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 FOLR1P15328 257 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 TLE3Q04726 772 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 SRSF4Q08170 494 aaKnown RBP14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 TAF13Q15543 124 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 LRRC37A5PQ49AS3 106 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 TRAPPC6BQ86SZ2 158 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 STPG2Q8N412 459 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 KCNRGQ8N5I3 272 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 RNF133Q8WVZ7 376 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 FAM46BQ96A09 425 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 MS4A7Q9GZW8 240 aaPredicted RBP14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 TMEM185BQ9H7F4 350 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 MED29Q9NX70 200 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 LOC100509620A0A075B734 347 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 IGKV1D-43A0A0B4J1Z2 117 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 LOC101059948A0A1B0GTJ6 334 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 CPED1A4D0V7 1026 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 OR14I1A6ND48 311 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 METTL12A8MUP2 240 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 OR2F2O95006 317 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 LIPCP11150 499 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 RNF4P78317 190 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 OR2F1Q13607 317 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 KLHL24Q6TFL4 600 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 SLC25A42Q86VD7 318 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 CARFQ8N187 725 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 D2HGDHQ8N465 521 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 TNFSF18Q9UNG2 199 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 RHBDD3Q9Y3P4 386 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 UNC13CQ8NB66 2214 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 IGHV1OR21-1A0A087WYE8 117 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 C2orf72A6NCS6 295 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 ANKUB1A6NFN9 424 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 HSD11B1P28845 292 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 APOBEC1P41238 236 aaKnown RBP14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 STARP49675 285 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 HSF1Q00613 529 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 C17orf67Q0P5P2 114 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 SHISA6Q6ZSJ9 500 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 OR10H5Q8NGA6 315 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 OR10K1Q8NGX5 313 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 PPP1R1CQ8WVI7 109 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 SEC22AQ96IW7 307 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 C5orf34Q96MH7 638 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 NPAS1Q99742 590 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 RASL12Q9NYN1 266 aa14.72□□□□□ -0.05
SEMA3B-207ENST00000441915 NPIPB13A6NJU9 1138 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 NPIPB4C9JG80 1138 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 CCSO14618 274 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 SLC25A4P12235 298 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 GPR85P60893 370 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 IL13RA1P78552 427 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 JMJD6Q6NYC1 403 aaPredicted RBP14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 C16orf47Q6ZP98 133 aaPredicted RBP14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 LYG2Q86SG7 212 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 PAQR4Q8N4S7 273 aaPredicted RBP14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 OR52N4Q8NGI2 321 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 VDAC3Q9Y277 283 aa14.71□□□□□ -0.05
SEMA3B-207ENST00000441915 ASXL3Q9C0F0 2248 aa14.71□□□□□ -0.06
SEMA3B-207ENST00000441915 ADAM10O14672 748 aa14.71□□□□□ -0.06
SEMA3B-207ENST00000441915 SYT7O43581 403 aa14.71□□□□□ -0.06
SEMA3B-207ENST00000441915 DUX1O43812 170 aa14.71□□□□□ -0.06
SEMA3B-207ENST00000441915 ZBTB25P24278 435 aa14.71□□□□□ -0.06
SEMA3B-207ENST00000441915 EIF1AXP47813 144 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms