RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 NKPD1Q17RQ9 610 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 LRRC36Q1X8D7 754 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 MBNL2Q5VZF2 373 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 GALNT4Q8N4A0 578 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 FAM81AQ8TBF8 368 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 THEM6Q8WUY1 208 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 UBE2FQ969M7 185 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 SPTSSAQ969W0 71 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 HRASLS5Q96KN8 279 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 COPS4Q9BT78 406 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 RAB1BQ9H0U4 201 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 PTTG3PQ9NZH4 202 aa16.67■□□□□ 0.26
SEMA3B-206ENST00000439487 ZNF878C9JN71 531 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 M0R135 149 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 F12P00748 615 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 IGHV3-13P01766 116 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 NAT2P11245 290 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 CR1P17927 2039 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 PRKXP51817 358 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 CLEC12BQ2HXU8 276 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 SLC16A9Q7RTY1 509 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 OR8J1Q8NGP2 316 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 OTOSQ8NHW6 89 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 APOBEC3DQ96AK3 386 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 ZNF799Q96GE5 643 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 C1QTNF5Q9BXJ0 243 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 SLCO1C1Q9NYB5 712 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 KLHDC2Q9Y2U9 406 aa16.66■□□□□ 0.26
SEMA3B-206ENST00000439487 H3BSA7 217 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 LCATP04180 440 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 LYNP07948 512 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 PEX2P28328 305 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 PSG7Q13046 419 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 COLCA1Q6ZS62 124 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 GID4Q8IVV7 300 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 ZNF454Q8N9F8 522 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 OR5L1Q8NGL2 311 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 RNF133Q8WVZ7 376 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 GTF3AQ92664 365 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 CMBLQ96DG6 245 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 COG8Q96MW5 612 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 KCNJ15Q99712 375 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 MS4A5Q9H3V2 200 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 IMPAD1Q9NX62 359 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 DNAJC27Q9NZQ0 273 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 GPR160Q9UJ42 338 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 GMPPBQ9Y5P6 360 aa16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 YLPM1P49750 1951 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-206ENST00000439487 TRIM64A6NGJ6 449 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 TRIM64BA6NI03 449 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 SLC22A31A6NKX4 558 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 J3QW42 95 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 TUBG1P23258 451 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 ANOS1P23352 680 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 OTX1P32242 354 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 SLC6A9P48067 706 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 GRB2P62993 217 aaKnown RBP16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 GGTLC2Q14390 218 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 HLXQ14774 488 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 MOGQ16653 247 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 ZNF525Q8N782 197 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 ZNF283Q8N7M2 679 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 SNX33Q8WV41 574 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 ZNF582Q96NG8 517 aaPredicted RBP16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 YIPF3Q9GZM5 350 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 TUBG2Q9NRH3 451 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 FAM118AQ9NWS6 357 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 LAMP5Q9UJQ1 280 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 N6AMT1Q9Y5N5 214 aa16.64■□□□□ 0.25
SEMA3B-206ENST00000439487 DLGAP1O14490 977 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 TIMM8AO60220 97 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 ERCC1P07992 297 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 H2BFMP0C1H6 154 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 SLC2A1P11166 492 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 ALOX5APP20292 161 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 HSD11B1P28845 292 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 SLC15A1P46059 708 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 TNK1Q13470 666 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 DRAM2Q6UX65 266 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 DNM1P46Q6ZS02 220 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 TRUB1Q8WWH5 349 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 NEU4Q8WWR8 484 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 HAVCR1Q96D42 359 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 CNN2Q99439 309 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 DCLRE1BQ9H816 532 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 SMPD3Q9NY59 655 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 NKX1-2Q9UD57 310 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 AASSQ9UDR5 926 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 PURGQ9UJV8 347 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 COPS3Q9UNS2 423 aa16.63■□□□□ 0.25
SEMA3B-206ENST00000439487 LOC100130705A0A1B0GUX0 176 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 C5orf63A6NC05 138 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 C17orf100A8MU93 164 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 HTR1FP30939 366 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 OPRL1P41146 370 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 CX3CR1P49238 355 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 MMP15P51511 669 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 SNAI3Q3KNW1 292 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 LRRN1Q6UXK5 716 aa16.62■□□□□ 0.25
SEMA3B-206ENST00000439487 FBXW12Q6X9E4 464 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms