RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 PAPLNO95428 1278 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 PLXDC2Q6UX71 529 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 SLC25A26Q70HW3 274 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 BBS1Q8NFJ9 593 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 OR4C3Q8NH37 302 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 SLAMF9Q96A28 289 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 TEAD3Q99594 435 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 C1QTNF3Q9BXJ4 246 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 ZCCHC4Q9H5U6 513 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 HINT3Q9NQE9 182 aaKnown RBP10.9□□□□□ -0.66
NEK1-201ENST00000439128 TREM2Q9NZC2 230 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 ADAMTSL1Q8N6G6 1762 aa10.9□□□□□ -0.66
NEK1-201ENST00000439128 A8MXE2 369 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 AQP7O14520 342 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 CCL2P13500 99 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 ZNF121P58317 390 aaPredicted RBP10.9□□□□□ -0.67
NEK1-201ENST00000439128 AQP6Q13520 282 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 LIPNQ5VXI9 398 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 WDR88Q6ZMY6 472 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 OR6M1Q8NGM8 313 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 SPACA5Q96QH8 159 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 ANKRD60Q9BZ19 345 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 MLXQ9UH92 298 aa10.9□□□□□ -0.67
NEK1-201ENST00000439128 ZNF816-ZNF321PA0A0X1KG74 233 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
NEK1-201ENST00000439128 PRR35P0CG20 571 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 PRF1P14222 555 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR2M7Q8NG81 312 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR51D1Q8NGF3 324 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR52I1Q8NGK6 324 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 RPEQ96AT9 228 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 CMTM3Q96MX0 182 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR5V1Q9UGF6 321 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 MYO10Q9HD67 2058 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 EML2O95834 649 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 ZNF626Q68DY1 528 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OLIG1Q8TAK6 271 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 KCNG2Q9UJ96 466 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 F5P12259 2224 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 LOC100289279A0A1B0GTE1 492 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 AIPO00170 330 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 APEX1P27695 318 aaKnown RBP10.89□□□□□ -0.67
NEK1-201ENST00000439128 ERP29P30040 261 aaKnown RBP10.89□□□□□ -0.67
NEK1-201ENST00000439128 KLRB1Q12918 225 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 DMRTC1Q5HYR2 192 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 CST9LP1Q5W188 147 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 TMEM65Q6PI78 240 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 SSX3Q99909 188 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 PDCD1LG2Q9BQ51 273 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 KCNE3Q9Y6H6 103 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 COL11A2P13942 1736 aaPredicted RBP10.89□□□□□ -0.67
NEK1-201ENST00000439128 LRP5LA4QPB2 252 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 CA5AP35218 305 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 PMP22Q01453 160 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 MPPED2Q15777 294 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 PRICKLE4Q2TBC4 344 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 METTL11BQ5VVY1 283 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR8B3Q8NGG8 313 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 OR8B2Q96RD0 313 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 DDA1Q9BW61 102 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 TMEM74BQ9NUR3 256 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 TAS2R16Q9NYV7 291 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 FAM221AA4D161 298 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 KLK8O60259 260 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 CA6P23280 308 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 GNG10P50151 68 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 LIMS2Q7Z4I7 341 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 PTPMT1Q8WUK0 201 aaPredicted RBP10.89□□□□□ -0.67
NEK1-201ENST00000439128 SLC35E1Q96K37 410 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 C1orf123Q9NWV4 160 aa10.89□□□□□ -0.67
NEK1-201ENST00000439128 VIRMAQ69YN4 1812 aaKnown RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 LNP1A1A4G5 178 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 HLA-HP01893 362 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 LUMP51884 338 aaPredicted RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 AGERQ15109 404 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 KRTCAP3Q53RY4 240 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 CDC20BQ86Y33 519 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 TUSC5Q8IXB3 177 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 C17orf78Q8N4C9 275 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 AMER3Q8N944 861 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 SAP25Q8TEE9 199 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 DPF1Q92782 380 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 CHODLQ9H9P2 273 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 UCK1Q9HA47 277 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 ING1Q9UK53 422 aaPredicted RBP10.88□□□□□ -0.67
NEK1-201ENST00000439128 GOSR1O95249 250 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 TGM6O95932 706 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 TBPP20226 339 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 PPP1CBP62140 327 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEK1-201ENST00000439128 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 CLEC2AQ6UVW9 174 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 OR2AE1Q8NHA4 323 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 NUBP2Q9Y5Y2 271 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 IGLV3-16A0A075B6K0 115 aa10.88□□□□□ -0.67
NEK1-201ENST00000439128 E9PI62 339 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 296.3 ms