RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SPTSSAQ969W0 71 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 MSI2Q96DH6 328 aaKnown RBP21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 MAP6Q96JE9 813 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 MSL2Q9HCI7 577 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 PNRC2Q9NPJ4 139 aaKnown RBP21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 TMEM160Q9NX00 188 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 KIF17Q9P2E2 1029 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 LOC100289279A0A1B0GTE1 492 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 HMGN1P05114 100 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 CD55P08174 381 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 PRKACGP22612 351 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 TPTEP56180 551 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 GINS1Q14691 196 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 HIPK1Q86Z02 1210 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 C1QTNF5Q9BXJ0 243 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 WDR76Q9H967 626 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 PTTG3PQ9NZH4 202 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 KCNS2Q9ULS6 477 aa21.03■□□□□ 0.96
RAPGEF1-206ENST00000438647 CLDN25C9JDP6 229 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 LMX1BO60663 402 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 CIB2O75838 187 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 SPARCP09486 303 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 ACSM4P0C7M7 580 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 CLUP10909 449 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 RPS27P42677 84 aaKnown RBP21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 CDK5R2Q13319 367 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 PCK2Q16822 640 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 RSPO1Q2MKA7 263 aaPredicted RBP21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 TEX30Q5JUR7 227 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 LYPD4Q6UWN0 246 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 COLCA1Q6ZS62 124 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 DCXRQ7Z4W1 244 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 ZNF511Q8NB15 262 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 UTP4Q969X6 686 aaKnown RBP21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 OTULINQ96BN8 352 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 NTN4Q9HB63 628 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 DDX28Q9NUL7 540 aaKnown RBP21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 CDC42EP3Q9UKI2 254 aa21.02■□□□□ 0.96
RAPGEF1-206ENST00000438647 M0R135 149 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 ZNF593O00488 134 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 TNFAIP6P98066 277 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 SLC3A1Q07837 685 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 MALLQ13021 153 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 CHRFAM7AQ494W8 412 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 ACSM5Q6NUN0 579 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR5K1Q8NHB7 308 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 ZNF799Q96GE5 643 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 TIMD4Q96H15 378 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 HCAR1Q9BXC0 346 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 AP4S1Q9Y587 144 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 JMJD1CQ15652 2540 aa21.01■□□□□ 0.95
RAPGEF1-206ENST00000438647 FAM183AA6NL82 134 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 PRR23D1E9PI22 279 aaPredicted RBP21■□□□□ 0.95
RAPGEF1-206ENST00000438647 SURF4O15260 269 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 TGFAP01135 160 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 LCATP04180 440 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 PRR23D2P0DMB1 279 aaPredicted RBP21■□□□□ 0.95
RAPGEF1-206ENST00000438647 FCGR1AP12314 374 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 SELEP16581 610 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 FASP25445 335 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 CDK5Q00535 292 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 HLXQ14774 488 aaPredicted RBP21■□□□□ 0.95
RAPGEF1-206ENST00000438647 ATP6AP1Q15904 470 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 LINC01590Q5TEZ4 76 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 LINC01356Q8N9X3 169 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR2Z1Q8NG97 314 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 PLEKHA8Q96JA3 519 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 ZNF582Q96NG8 517 aaPredicted RBP21■□□□□ 0.95
RAPGEF1-206ENST00000438647 COPS4Q9BT78 406 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 PAPOLBQ9NRJ5 636 aaKnown RBP21■□□□□ 0.95
RAPGEF1-206ENST00000438647 LPAR3Q9UBY5 353 aa21■□□□□ 0.95
RAPGEF1-206ENST00000438647 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21■□□□□ 0.952e-6■■■□□ 19
RAPGEF1-206ENST00000438647 GLCEO94923 617 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 TNFRSF1AP19438 455 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 IL2RGP31785 369 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 SLC6A9P48067 706 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 CCNIQ14094 377 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 TAF13Q15543 124 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 CCDC121Q6ZUS5 278 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR10S1Q8NGN2 331 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 CLDND2Q8NHS1 167 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 CCL17Q92583 94 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 RAB1CQ92928 201 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 DUS3LQ96G46 650 aaKnown RBP20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 INTS14Q96SY0 518 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 MED20Q9H944 212 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 IL19Q9UHD0 177 aa20.99■□□□□ 0.95
RAPGEF1-206ENST00000438647 ZNF878C9JN71 531 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 GSTT1P30711 240 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 OTX1P32242 354 aaPredicted RBP20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR2T2Q6IF00 324 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 FAHD1Q6P587 224 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 DRAM2Q6UX65 266 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 ERI1Q8IV48 349 aaKnown RBP20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR5AS1Q8N127 324 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 PARP8Q8N3A8 854 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR8G5Q8NG78 346 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR13G1Q8NGZ3 307 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 SLAMF6Q96DU3 332 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 C1orf159Q96HA4 380 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms